RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 UPRTQ96BW1 309 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 TAMM41Q96BW9 452 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 PLEKHA8Q96JA3 519 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 SIGLEC11Q96RL6 698 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 EBF4Q9BQW3 602 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 SSBP3Q9BWW4 388 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 C1QTNF5Q9BXJ0 243 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 BAG5Q9UL15 447 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 HIF3AQ9Y2N7 669 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 MED31Q9Y3C7 131 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 IGKV1D-43A0A0B4J1Z2 117 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 J3QW42 95 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 ANGPT2O15123 496 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 WNT2P09544 360 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 MSR1P21757 451 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 TAS2R41P59536 307 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 RPL27P61353 136 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 SEC61A1P61619 476 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 FMODQ06828 376 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 ANKDD1AQ495B1 522 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 SPRNQ5BIV9 151 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 MOSPD2Q8NHP6 518 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 PFN4Q8NHR9 129 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 TMEM255BQ8WV15 326 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 STON2Q8WXE9 905 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 TLCD1Q96CP7 247 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 PRDM13Q9H4Q3 707 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 BEX1Q9HBH7 125 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 DCAF16Q9NXF7 216 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 MIOXQ9UGB7 285 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 V9GYY5 206 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 ARHGAP32A7KAX9 2087 aa13.23□□□□□ -0.29
HERPUD1-215ENST00000568676 A6NIZ1 184 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 CEACAM18A8MTB9 384 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 TMEM178BH3BS89 294 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 KNG1P01042 644 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 MDKP21741 143 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 CD80P33681 288 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 MTPNP58546 118 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 RAP1BP61224 184 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 RAP1AP62834 184 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 PAX2Q02962 417 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 SCRN3Q0VDG4 424 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 VMACQ2NL98 169 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 ZNF774Q6NX45 483 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 C17orf107Q6ZR85 190 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 SPATC1Q76KD6 591 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 NKAIN4Q8IVV8 208 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 OR4F5Q8NH21 305 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 LRRC8CQ8TDW0 803 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 RAB40AQ8WXH6 277 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 HAVCR1Q96D42 359 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 C20orf141Q9NUB4 165 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 RIMS3Q9UJD0 308 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 SH3GLB1Q9Y371 365 aa13.22□□□□□ -0.29
HERPUD1-215ENST00000568676 CRYBA1P05813 215 aa13.21□□□□□ -0.29
HERPUD1-215ENST00000568676 IGHV4-38-2P0DP08 117 aa13.21□□□□□ -0.29
HERPUD1-215ENST00000568676 IFNA8P32881 189 aa13.21□□□□□ -0.29
HERPUD1-215ENST00000568676 RPL15P61313 204 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-215ENST00000568676 GNB2P62879 340 aa13.21□□□□□ -0.29
HERPUD1-215ENST00000568676 GUCY1A3Q02108 690 aa13.21□□□□□ -0.29
HERPUD1-215ENST00000568676 LAPTM4AQ15012 233 aa13.21□□□□□ -0.29
HERPUD1-215ENST00000568676 ITLN1Q8WWA0 313 aa13.21□□□□□ -0.29
HERPUD1-215ENST00000568676 PTP4A1Q93096 173 aa13.21□□□□□ -0.29
HERPUD1-215ENST00000568676 OR2V2Q96R30 315 aa13.21□□□□□ -0.29
HERPUD1-215ENST00000568676 GCM1Q9NP62 436 aa13.21□□□□□ -0.29
HERPUD1-215ENST00000568676 NOX4Q9NPH5 578 aa13.21□□□□□ -0.29
HERPUD1-215ENST00000568676 TGP01266 2768 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 IGHV2-70DA0A0C4DH43 119 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 A0A1W2PPL8 197 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 TIMM23O14925 209 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 AHCYL1O43865 530 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 IFNA14P01570 189 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 RAC2P15153 192 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 RPS2P15880 293 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 MMP16P51512 607 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 NFYCQ13952 458 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 SELPLGQ14242 412 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 ENDOGQ14249 297 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 ZNF181Q2M3W8 571 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 Q6ZR03 302 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 NLRC3Q7RTR2 1065 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 TMEM86BQ8N661 226 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 OR10A6Q8NH74 314 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 ZBTB9Q96C00 473 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 CMBLQ96DG6 245 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 NEIL1Q96FI4 390 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 SH3GL1Q99961 368 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 POLE4Q9NR33 117 aa13.2□□□□□ -0.3
HERPUD1-215ENST00000568676 TRAV40A0A0B4J280 105 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 KIR2DS1A0A191URI9 304 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 LRRC30A6NM36 301 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 SRRM5B3KS81 715 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 M0QZ24 198 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 SGCEO43556 437 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 DOK2O60496 412 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 GPANK1O95872 356 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 HTR5AP47898 357 aa13.19□□□□□ -0.3
HERPUD1-215ENST00000568676 SRP9P49458 86 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms