RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 GPANK1O95872 356 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 PNPP00491 289 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 CRHP06850 196 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 CT45A8P0DMV1 189 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 CT45A9P0DMV2 189 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 SPTBP11277 2137 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 FOLR2P14207 255 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 WASP42768 502 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 KCNJ3P48549 501 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 ARRB1P49407 418 aaPredicted RBP14.11□□□□□ -0.15
COMMD4-215ENST00000566843 PJVKQ0ZLH3 352 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 MEP1BQ16820 701 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 MOGAT2Q3SYC2 334 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 CT45A2Q5DJT8 189 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 FAM78AQ5JUQ0 283 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 GLYATL3Q5SZD4 288 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 DRAM2Q6UX65 266 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 NUP54Q7Z3B4 507 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 TAF8Q7Z7C8 310 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 ZNF584Q8IVC4 421 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 ZNF679Q8IYX0 411 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 BCORP1Q8N888 145 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 OR4K17Q8NGC6 315 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 BAHD1Q8TBE0 780 aaPredicted RBP14.11□□□□□ -0.15
COMMD4-215ENST00000566843 NKX3-1Q99801 234 aaPredicted RBP14.11□□□□□ -0.15
COMMD4-215ENST00000566843 UQCC1Q9NVA1 299 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 MYEF2Q9P2K5 600 aaKnown RBP14.11□□□□□ -0.15
COMMD4-215ENST00000566843 MPDZO75970 2070 aa14.11□□□□□ -0.15
COMMD4-215ENST00000566843 OR2W5A6NFC9 320 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 DBX1A6NMT0 343 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 DCNP07585 359 aaKnown RBP14.1□□□□□ -0.15
COMMD4-215ENST00000566843 LIPCP11150 499 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 PSMB6P28072 239 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 LSSP48449 732 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.1□□□□□ -0.15
COMMD4-215ENST00000566843 C1orf100Q5SVJ3 147 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 FNDC7Q5VTL7 733 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 PARGQ86W56 976 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 TAS2R4Q9NYW5 299 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 CPED1A4D0V7 1026 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 MEGF11A6BM72 1044 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 PGAM2P15259 253 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 AVPR2P30518 371 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 IL13RA1P78552 427 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 ROM1Q03395 351 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 RNASE10Q5GAN6 216 aaKnown RBP14.1□□□□□ -0.15
COMMD4-215ENST00000566843 OR4S1Q8NGB4 309 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 OR1E3Q8WZA6 343 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 SYT4Q9H2B2 425 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 RNF122Q9H9V4 155 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 CKLFQ9UBR5 152 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 DPP7Q9UHL4 492 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 TMED7Q9Y3B3 224 aa14.1□□□□□ -0.15
COMMD4-215ENST00000566843 TRBV23OR9-2A0A075B6M9 112 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 LOC390937A0A1W2PQ73 354 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 A6NCN8 305 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 TGFBR3LH3BV60 316 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 DUS4LO95620 317 aaKnown RBP14.09□□□□□ -0.15
COMMD4-215ENST00000566843 CD2P06729 351 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 POU2F2P09086 479 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 RAB6AP20340 208 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 PDZK1IP1Q13113 114 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 HYAL4Q2M3T9 481 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 ZNF260Q3ZCT1 412 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 CATSPERDQ86XM0 798 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 LYPD6Q86Y78 171 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 CSNK1A1LQ8N752 337 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 C12orf76Q8N812 135 aaPredicted RBP14.09□□□□□ -0.15
COMMD4-215ENST00000566843 PPP1R14AQ96A00 147 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 RNF126Q9BV68 326 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 NUDT9Q9BW91 350 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 CHMP1AQ9HD42 196 aaPredicted RBP14.09□□□□□ -0.15
COMMD4-215ENST00000566843 CGGBP1Q9UFW8 167 aaPredicted RBP14.09□□□□□ -0.15
COMMD4-215ENST00000566843 TRANK1O15050 2925 aa14.09□□□□□ -0.15
COMMD4-215ENST00000566843 TNRC18O15417 2968 aaPredicted RBP14.08□□□□□ -0.15
COMMD4-215ENST00000566843 TMEM235A6NFC5 223 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 WIPF3A6NGB9 483 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 EFSO43281 561 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 OIP5O43482 229 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 EIF3GO75821 320 aaKnown RBP eCLIP14.08□□□□□ -0.15
COMMD4-215ENST00000566843 F12P00748 615 aaPredicted RBP14.08□□□□□ -0.15
COMMD4-215ENST00000566843 HOXC4P09017 264 aaPredicted RBP14.08□□□□□ -0.15
COMMD4-215ENST00000566843 ACAA1P09110 424 aaPredicted RBP14.08□□□□□ -0.15
COMMD4-215ENST00000566843 PVRP15151 417 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 SLC6A9P48067 706 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 SKP1P63208 163 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 ADAM8P78325 824 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 TSC22D1Q15714 1073 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 NKPD1Q17RQ9 610 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 NKAPLQ5M9Q1 402 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 RHOUQ7L0Q8 258 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 OR10G6Q8NH81 332 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 CDC6Q99741 560 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 NMES1Q9C002 83 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 SELENOIQ9C0D9 397 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 TREM1Q9NP99 234 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 RHBDD3Q9Y3P4 386 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 CSAG2Q9Y5P2 127 aa14.08□□□□□ -0.15
COMMD4-215ENST00000566843 PLRG1O43660 514 aaKnown RBP14.08□□□□□ -0.16
COMMD4-215ENST00000566843 CSN2P05814 226 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms