RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 CR1LQ2VPA4 569 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 PCGF3Q3KNV8 242 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 ZNF718Q3SXZ3 478 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 SPRNQ5BIV9 151 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 TMEM154Q6P9G4 183 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 FITM2Q8N6M3 262 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 SNX33Q8WV41 574 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 SLC7A6Q92536 515 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 NSMCE2Q96MF7 247 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 TSSK2Q96PF2 358 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 RERGLQ9H628 205 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 EIF3KQ9UBQ5 218 aaKnown RBP12.47□□□□□ -0.41
FANCA-220ENST00000566409 GPR160Q9UJ42 338 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 AURKCQ9UQB9 309 aa12.47□□□□□ -0.41
FANCA-220ENST00000566409 ZSCAN5BA6NJL1 495 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 FAM157AC9JC47 383 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 PPIHO43447 177 aaKnown RBP12.46□□□□□ -0.41
FANCA-220ENST00000566409 KHDRBS3O75525 346 aaKnown RBP12.46□□□□□ -0.41
FANCA-220ENST00000566409 DCTN3O75935 186 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 PPP1R3DO95685 299 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 IGHV1-46P01743 117 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 COX5BP10606 129 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 ITGA2P17301 1181 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 GCH1P30793 250 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 ZNF81P51508 661 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 SPIBQ01892 262 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 HNRNPA0Q13151 305 aaKnown RBP12.46□□□□□ -0.41
FANCA-220ENST00000566409 KRT72Q14CN4 511 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 RFX4Q33E94 735 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 SMARCD3Q6STE5 483 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 VASH1Q7L8A9 365 aaPredicted RBP12.46□□□□□ -0.41
FANCA-220ENST00000566409 GLB1L2Q8IW92 636 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 CCT8L2Q96SF2 557 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 WACQ9BTA9 647 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 IL1RAPQ9NPH3 570 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 TREM2Q9NZC2 230 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 ASH2LQ9UBL3 628 aa12.46□□□□□ -0.41
FANCA-220ENST00000566409 DYSFO75923 2080 aa12.46□□□□□ -0.42
FANCA-220ENST00000566409 OR6C6A6NF89 314 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 PHF1O43189 567 aaPredicted RBP12.45□□□□□ -0.42
FANCA-220ENST00000566409 SGCEO43556 437 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 SPRY3O43610 288 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 DOK2O60496 412 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 FABP3P05413 133 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 GAAP10253 952 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 SRD5A1P18405 259 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 ATP6V1B2P21281 511 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 FPR3P25089 353 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 RRM2P31350 389 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 RBMXP38159 391 aaKnown RBP12.45□□□□□ -0.42
FANCA-220ENST00000566409 GSSP48637 474 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 SMIM11AP58511 58 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 LSM6P62312 80 aaKnown RBP12.45□□□□□ -0.42
FANCA-220ENST00000566409 SCRN3Q0VDG4 424 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 PSG7Q13046 419 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 KCNMB1Q16558 191 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 MOGQ16653 247 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 MEP1BQ16820 701 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 CCDC92Q53HC0 331 aaPredicted RBP12.45□□□□□ -0.42
FANCA-220ENST00000566409 AVPI1Q5T686 147 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 C1orf94Q6P1W5 598 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 C16orf89Q6UX73 402 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 CYP2R1Q6VVX0 501 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 USP51Q70EK9 711 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 ADCK1Q86TW2 530 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 SPATA3Q8NHX4 192 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 ERMAPQ96PL5 475 aaPredicted RBP12.45□□□□□ -0.42
FANCA-220ENST00000566409 NDEL1Q9GZM8 345 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 OR52D1Q9H346 318 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 ELOVL3Q9HB03 270 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 MSL2Q9HCI7 577 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 TBCCD1Q9NVR7 557 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 NDRG4Q9ULP0 352 aaKnown RBP12.45□□□□□ -0.42
FANCA-220ENST00000566409 STARD10Q9Y365 291 aa12.45□□□□□ -0.42
FANCA-220ENST00000566409 IGLV1-36A0A0B4J1U3 117 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 IGHV1-69-2A0A0G2JMI3 117 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 RNF212BA8MTL3 300 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 B2RBV5 119 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 ARPC3O15145 178 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 RER1O15258 196 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 OR10H3O60404 316 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 ADH4P08319 380 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 DBHP09172 617 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 HTR5AP47898 357 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 RPS6KA3P51812 740 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 HMGA2P52926 109 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 HIST1H3AP68431 136 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 SRSF2Q01130 221 aaKnown RBP12.44□□□□□ -0.42
FANCA-220ENST00000566409 AQP6Q13520 282 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 SPATS1Q496A3 300 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 HIST2H3PS2Q5TEC6 136 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 PGBD2Q6P3X8 592 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 HIST2H3AQ71DI3 136 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 ZDHHC21Q8IVQ6 265 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 PHC2Q8IXK0 858 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 C1orf174Q8IYL3 243 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 OR6V1Q8N148 313 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 FANK1Q8TC84 345 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 MCUR1Q96AQ8 359 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 SAMD8Q96LT4 415 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms