RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ABHD16AO95870 558 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 NGFP01138 241 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 ZNF26P17031 533 aaPredicted RBP17.15■□□□□ 0.34
CLN6-207ENST00000566347 TUBG1P23258 451 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 SDHAP31040 664 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 SRSF2Q01130 221 aaKnown RBP17.15■□□□□ 0.34
CLN6-207ENST00000566347 KRR1Q13601 381 aaKnown RBP17.15■□□□□ 0.34
CLN6-207ENST00000566347 FGD3Q5JSP0 725 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 AVPI1Q5T686 147 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 GLYATQ6IB77 296 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 ACSM5Q6NUN0 579 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 ZER1Q7Z7L7 766 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 TEX29Q8N6K0 151 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 NPEPL1Q8NDH3 523 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 GPX7Q96SL4 187 aaPredicted RBP17.15■□□□□ 0.34
CLN6-207ENST00000566347 EMC7Q9NPA0 242 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 TUBG2Q9NRH3 451 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 DCAF13Q9NV06 445 aaKnown RBP17.15■□□□□ 0.34
CLN6-207ENST00000566347 TBCCD1Q9NVR7 557 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 EGFL7Q9UHF1 273 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 SIGLEC7Q9Y286 467 aa17.15■□□□□ 0.34
CLN6-207ENST00000566347 ZSCAN5BA6NJL1 495 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 SGCEO43556 437 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 DOK2O60496 412 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 PTP4A3O75365 173 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 SCG5P05408 212 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 CTLA4P16410 223 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 GSTM3P21266 225 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 LIMS1P48059 325 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 SLC3A1Q07837 685 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 TMEM255AQ5JRV8 349 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 SHQ1Q6PI26 577 aaKnown RBP17.14■□□□□ 0.33
CLN6-207ENST00000566347 ADCK1Q86TW2 530 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 NRIP3Q9NQ35 241 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 ADA2Q9NZK5 511 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 WIPI2Q9Y4P8 454 aa17.14■□□□□ 0.33
CLN6-207ENST00000566347 TIMM8AO60220 97 aaPredicted RBP17.13■□□□□ 0.33
CLN6-207ENST00000566347 ITGA2P17301 1181 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 OMPP47874 163 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 HTR5AP47898 357 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 AQP6Q13520 282 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 KRT72Q14CN4 511 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 MTX3Q5HYI7 312 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 GLB1L2Q8IW92 636 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 CCL17Q92583 94 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 RASD2Q96D21 266 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 RSRC1Q96IZ7 334 aaKnown RBP17.13■□□□□ 0.33
CLN6-207ENST00000566347 C7orf34Q96L11 122 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 VSX1Q9NZR4 365 aaPredicted RBP17.13■□□□□ 0.33
CLN6-207ENST00000566347 KLHL21Q9UJP4 597 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 AURKCQ9UQB9 309 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 CACNG2Q9Y698 323 aa17.13■□□□□ 0.33
CLN6-207ENST00000566347 ATP8B1O43520 1251 aa17.12■□□□□ 0.33
CLN6-207ENST00000566347 SLC16A7O60669 478 aa17.12■□□□□ 0.33
CLN6-207ENST00000566347 KHDRBS3O75525 346 aaKnown RBP17.12■□□□□ 0.33
CLN6-207ENST00000566347 PNPP00491 289 aa17.12■□□□□ 0.33
CLN6-207ENST00000566347 IGHV2-5P01817 119 aa17.12■□□□□ 0.33
CLN6-207ENST00000566347 CD55P08174 381 aa17.12■□□□□ 0.33
CLN6-207ENST00000566347 LSM6P62312 80 aaKnown RBP17.12■□□□□ 0.33
CLN6-207ENST00000566347 DPY19L2P2Q6ZN68 376 aa17.12■□□□□ 0.33
CLN6-207ENST00000566347 VASH1Q7L8A9 365 aaPredicted RBP17.12■□□□□ 0.33
CLN6-207ENST00000566347 PEG10Q86TG7 708 aaKnown RBP17.12■□□□□ 0.33
CLN6-207ENST00000566347 DHRS1Q96LJ7 313 aa17.12■□□□□ 0.33
CLN6-207ENST00000566347 COG8Q96MW5 612 aa17.12■□□□□ 0.33
CLN6-207ENST00000566347 NSRP1Q9H0G5 558 aaKnown RBP17.12■□□□□ 0.33
CLN6-207ENST00000566347 SYT4Q9H2B2 425 aa17.12■□□□□ 0.33
CLN6-207ENST00000566347 METTL17Q9H7H0 456 aaPredicted RBP17.12■□□□□ 0.33
CLN6-207ENST00000566347 GORASP2Q9H8Y8 452 aa17.12■□□□□ 0.33
CLN6-207ENST00000566347 PLEK2Q9NYT0 353 aa17.12■□□□□ 0.33
CLN6-207ENST00000566347 A0A0A6YYJ9 748 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 TRBV4-1A0A0J9YWV2 114 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 UNC119BA6NIH7 251 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 DEAF1O75398 565 aaPredicted RBP17.11■□□□□ 0.33
CLN6-207ENST00000566347 UBOX5O94941 541 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 MPZL1O95297 269 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 RPS6KA3P51812 740 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 SMIM11AP58511 58 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 PSG7Q13046 419 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 FAHD2BQ6P2I3 314 aaPredicted RBP17.11■□□□□ 0.33
CLN6-207ENST00000566347 THSD4Q6ZMP0 1018 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 FAHD2AQ96GK7 314 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 FAM107BQ9H098 131 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 OCEL1Q9H607 264 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 RERGLQ9H628 205 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 MSL2Q9HCI7 577 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 G6PC2Q9NQR9 355 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 IER3IP1Q9Y5U9 82 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 TANC2Q9HCD6 1990 aa17.11■□□□□ 0.33
CLN6-207ENST00000566347 A0A0G2JMP0 313 aa17.1■□□□□ 0.33
CLN6-207ENST00000566347 A0A0X1KG70 313 aa17.1■□□□□ 0.33
CLN6-207ENST00000566347 PLPP2O43688 288 aa17.1■□□□□ 0.33
CLN6-207ENST00000566347 TXNDC12O95881 172 aa17.1■□□□□ 0.33
CLN6-207ENST00000566347 TNFSF4P23510 183 aa17.1■□□□□ 0.33
CLN6-207ENST00000566347 TNFAIP6P98066 277 aaPredicted RBP17.1■□□□□ 0.33
CLN6-207ENST00000566347 CDK5R2Q13319 367 aa17.1■□□□□ 0.33
CLN6-207ENST00000566347 SEC23BQ15437 767 aa17.1■□□□□ 0.33
CLN6-207ENST00000566347 DNM1P34Q6PK57 102 aa17.1■□□□□ 0.33
CLN6-207ENST00000566347 SMARCD3Q6STE5 483 aa17.1■□□□□ 0.33
CLN6-207ENST00000566347 RNF148Q8N7C7 305 aa17.1■□□□□ 0.33
CLN6-207ENST00000566347 FAM86B1Q8N7N1 296 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms