RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 TOXO94900 526 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 PSMB10P40306 273 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 FOXG1P55316 489 aaPredicted RBP26.87■■□□□ 1.89
CTCF-203ENST00000566078 TAS2R43P59537 309 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 ROM1Q03395 351 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 FAM27BQ5VT28 67 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 ZNF813Q6ZN06 617 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 ATCAYQ86WG3 371 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 ANKRD13BQ86YJ7 626 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 ZNF679Q8IYX0 411 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 SLAMF6Q96DU3 332 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 SH3GL3Q99963 347 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 RSL24D1Q9UHA3 163 aaKnown RBP26.87■■□□□ 1.89
CTCF-203ENST00000566078 TMIGD3P0DMS9 266 aaPredicted RBP26.87■■□□□ 1.89
CTCF-203ENST00000566078 CELP19835 753 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 NR4A1P22736 598 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 ARF1P84077 181 aaKnown RBP26.87■■□□□ 1.89
CTCF-203ENST00000566078 KLHL24Q6TFL4 600 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 SLC16A12Q6ZSM3 486 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 SLC22A24Q8N4F4 322 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 ZNF420Q8TAQ5 688 aaPredicted RBP26.87■■□□□ 1.89
CTCF-203ENST00000566078 DGCR14Q96DF8 476 aaKnown RBP26.87■■□□□ 1.89
CTCF-203ENST00000566078 ELOVL3Q9HB03 270 aa26.87■■□□□ 1.89
CTCF-203ENST00000566078 SIRT4Q9Y6E7 314 aaPredicted RBP26.87■■□□□ 1.89
CTCF-203ENST00000566078 RP1L1Q8IWN7 2480 aaPredicted RBP26.86■■□□□ 1.89
CTCF-203ENST00000566078 RPP14O95059 124 aaKnown RBP26.86■■□□□ 1.89
CTCF-203ENST00000566078 IL2RAP01589 272 aa26.86■■□□□ 1.89
CTCF-203ENST00000566078 GADD45AP24522 165 aa26.86■■□□□ 1.89
CTCF-203ENST00000566078 TIMP3P35625 211 aa26.86■■□□□ 1.89
CTCF-203ENST00000566078 AQP6Q13520 282 aa26.86■■□□□ 1.89
CTCF-203ENST00000566078 LIPNQ5VXI9 398 aa26.86■■□□□ 1.89
CTCF-203ENST00000566078 RNF133Q8WVZ7 376 aa26.86■■□□□ 1.89
CTCF-203ENST00000566078 CNTNAP3BQ96NU0 1288 aa26.86■■□□□ 1.89
CTCF-203ENST00000566078 CNTNAP3Q9BZ76 1288 aa26.86■■□□□ 1.89
CTCF-203ENST00000566078 TINAGQ9UJW2 476 aa26.86■■□□□ 1.89
CTCF-203ENST00000566078 LRP12Q9Y561 859 aa26.86■■□□□ 1.89
CTCF-203ENST00000566078 CST2P09228 141 aa26.85■■□□□ 1.89
CTCF-203ENST00000566078 TMBIM6P55061 237 aa26.85■■□□□ 1.89
CTCF-203ENST00000566078 EIF2S3LQ2VIR3 472 aaKnown RBP26.85■■□□□ 1.89
CTCF-203ENST00000566078 OR7E24Q6IFN5 339 aa26.85■■□□□ 1.89
CTCF-203ENST00000566078 EGFL6Q8IUX8 553 aa26.85■■□□□ 1.89
CTCF-203ENST00000566078 OR10S1Q8NGN2 331 aa26.85■■□□□ 1.89
CTCF-203ENST00000566078 CENPMQ9NSP4 180 aa26.85■■□□□ 1.89
CTCF-203ENST00000566078 ST6GALNAC2Q9UJ37 374 aa26.85■■□□□ 1.89
CTCF-203ENST00000566078 RER1O15258 196 aa26.84■■□□□ 1.89
CTCF-203ENST00000566078 LRRTM2O43300 516 aa26.84■■□□□ 1.89
CTCF-203ENST00000566078 TNFSF13O75888 250 aa26.84■■□□□ 1.89
CTCF-203ENST00000566078 CRHP06850 196 aa26.84■■□□□ 1.89
CTCF-203ENST00000566078 NAXEQ8NCW5 288 aa26.84■■□□□ 1.89
CTCF-203ENST00000566078 FBXO17Q96EF6 278 aa26.84■■□□□ 1.89
CTCF-203ENST00000566078 ZFP3Q96NJ6 502 aa26.84■■□□□ 1.89
CTCF-203ENST00000566078 SH3BGRL2Q9UJC5 107 aa26.84■■□□□ 1.89
CTCF-203ENST00000566078 HSPB2A8KAH6 182 aa26.83■■□□□ 1.89
CTCF-203ENST00000566078 GLI4P10075 376 aa26.83■■□□□ 1.89
CTCF-203ENST00000566078 RIDAP52758 137 aaKnown RBP26.83■■□□□ 1.89
CTCF-203ENST00000566078 HSPB2Q16082 182 aa26.83■■□□□ 1.89
CTCF-203ENST00000566078 NRN1LQ496H8 165 aa26.83■■□□□ 1.89
CTCF-203ENST00000566078 ARL9Q6T311 187 aa26.83■■□□□ 1.89
CTCF-203ENST00000566078 RAB2BQ8WUD1 216 aa26.83■■□□□ 1.89
CTCF-203ENST00000566078 WBP1Q96G27 269 aa26.83■■□□□ 1.89
CTCF-203ENST00000566078 GABARAPO95166 117 aa26.83■■□□□ 1.88
CTCF-203ENST00000566078 FARS2O95363 451 aaKnown RBP26.83■■□□□ 1.88
CTCF-203ENST00000566078 H2BFMP0C1H6 154 aa26.83■■□□□ 1.88
CTCF-203ENST00000566078 MPGP29372 298 aa26.83■■□□□ 1.88
CTCF-203ENST00000566078 OPRL1P41146 370 aa26.83■■□□□ 1.88
CTCF-203ENST00000566078 RPS25P62851 125 aaKnown RBP26.83■■□□□ 1.88
CTCF-203ENST00000566078 MRPL28Q13084 256 aaKnown RBP26.83■■□□□ 1.88
CTCF-203ENST00000566078 CDK5R1Q15078 307 aa26.83■■□□□ 1.88
CTCF-203ENST00000566078 RPL22L1Q6P5R6 122 aaKnown RBP26.83■■□□□ 1.88
CTCF-203ENST00000566078 SLC16A14Q7RTX9 510 aa26.83■■□□□ 1.88
CTCF-203ENST00000566078 BTLAQ7Z6A9 289 aa26.83■■□□□ 1.88
CTCF-203ENST00000566078 GJC3Q8NFK1 279 aa26.83■■□□□ 1.88
CTCF-203ENST00000566078 HAVCR2Q8TDQ0 301 aa26.83■■□□□ 1.88
CTCF-203ENST00000566078 RPL3LQ92901 407 aaKnown RBP26.83■■□□□ 1.88
CTCF-203ENST00000566078 OR51E2Q9H255 320 aa26.83■■□□□ 1.88
CTCF-203ENST00000566078 PROCRQ9UNN8 238 aa26.83■■□□□ 1.88
CTCF-203ENST00000566078 ZNF878C9JN71 531 aa26.82■■□□□ 1.88
CTCF-203ENST00000566078 ITGA5P08648 1049 aa26.82■■□□□ 1.88
CTCF-203ENST00000566078 TGM4P49221 684 aa26.82■■□□□ 1.88
CTCF-203ENST00000566078 ST3GAL2Q16842 350 aa26.82■■□□□ 1.88
CTCF-203ENST00000566078 CCDC58Q4VC31 144 aa26.82■■□□□ 1.88
CTCF-203ENST00000566078 ZNF627Q7L945 461 aa26.82■■□□□ 1.88
CTCF-203ENST00000566078 SKA3Q8IX90 412 aa26.82■■□□□ 1.88
CTCF-203ENST00000566078 HSD17B8Q92506 261 aa26.82■■□□□ 1.88
CTCF-203ENST00000566078 RNF166Q96A37 237 aaPredicted RBP26.82■■□□□ 1.88
CTCF-203ENST00000566078 C12orf43Q96C57 262 aaKnown RBP26.82■■□□□ 1.88
CTCF-203ENST00000566078 PNRC2Q9NPJ4 139 aaKnown RBP26.82■■□□□ 1.88
CTCF-203ENST00000566078 H3BMQ9 156 aa26.81■■□□□ 1.88
CTCF-203ENST00000566078 AIREO43918 545 aa26.81■■□□□ 1.88
CTCF-203ENST00000566078 ZNF254O75437 659 aa26.81■■□□□ 1.88
CTCF-203ENST00000566078 CEACAM8P31997 349 aaPredicted RBP26.81■■□□□ 1.88
CTCF-203ENST00000566078 SH3BGRP55822 239 aaPredicted RBP26.81■■□□□ 1.88
CTCF-203ENST00000566078 SLC3A1Q07837 685 aa26.81■■□□□ 1.88
CTCF-203ENST00000566078 NFATC3Q12968 1075 aa26.81■■□□□ 1.88
CTCF-203ENST00000566078 GPR50Q13585 617 aa26.81■■□□□ 1.88
CTCF-203ENST00000566078 DMKNQ6E0U4 476 aaPredicted RBP26.81■■□□□ 1.88
CTCF-203ENST00000566078 DEGS2Q6QHC5 323 aa26.81■■□□□ 1.88
CTCF-203ENST00000566078 HIST2H2ABQ8IUE6 130 aaPredicted RBP26.81■■□□□ 1.88
CTCF-203ENST00000566078 TMEM203Q969S6 136 aa26.81■■□□□ 1.88
CTCF-203ENST00000566078 STARD4Q96DR4 205 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms