RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 RAB11AP62491 216 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 ITIH4Q14624 930 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 RAB11BQ15907 218 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 LIN9Q5TKA1 542 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 Q6ZSR3 168 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 SSX9Q7RTT3 188 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 GABRG1Q8N1C3 465 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 CSGALNACT2Q8N6G5 542 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 SPERTQ8NA61 448 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 FNDC5Q8NAU1 212 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 OR4F6Q8NGB9 312 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 ESR2Q92731 530 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 KIFAP3Q92845 792 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.3□□□□□ -2.04
UBR1-205ENST00000564540 SGK3Q96BR1 496 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 PDXPQ96GD0 296 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 PLEKHA8Q96JA3 519 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 CNN2Q99439 309 aaKnown RBP2.3□□□□□ -2.04
UBR1-205ENST00000564540 ILKAPQ9H0C8 392 aaPredicted RBP2.3□□□□□ -2.04
UBR1-205ENST00000564540 GBA3Q9H227 469 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 PPA2Q9H2U2 334 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 FBXO44Q9H4M3 255 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 ELOVL6Q9H5J4 265 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 ZNF355PQ9NSJ1 428 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 MTCH1Q9NZJ7 389 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 CD84Q9UIB8 345 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 STK38LQ9Y2H1 464 aa2.3□□□□□ -2.04
UBR1-205ENST00000564540 IGLV3-22A0A075B6J6 115 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 A8MXQ7 604 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 HSD17B6O14756 317 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 POLR3GO15318 223 aaPredicted RBP2.29□□□□□ -2.04
UBR1-205ENST00000564540 C1orf105O95561 183 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 TSPAN13O95857 204 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 TGM6O95932 706 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 IGKV4-1P06312 121 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 MSR1P21757 451 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 U2AF2P26368 475 aaKnown RBP eCLIP2.29□□□□□ -2.042e-8■■■□□ 14.7
UBR1-205ENST00000564540 IL12AP29459 219 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 OPRD1P41143 372 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 KCNJ2P63252 427 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 XIAPP98170 497 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 HNRNPA1L2Q32P51 320 aaKnown RBP2.29□□□□□ -2.04
UBR1-205ENST00000564540 DNLZQ5SXM8 178 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 CNIH2Q6PI25 160 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 NCCRP1Q6ZVX7 275 aaPredicted RBP2.29□□□□□ -2.04
UBR1-205ENST00000564540 VTCN1Q7Z7D3 282 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 LINC00523Q86TU6 105 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 MICU2Q8IYU8 434 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 B3GNT7Q8NFL0 401 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 LILRB4Q8NHJ6 448 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 PLPPR1Q8TBJ4 325 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 TOP1MTQ969P6 601 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 CXorf40BQ96DE9 158 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 WFIKKN1Q96NZ8 548 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 CLCC1Q96S66 551 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 CHAC1Q9BUX1 264 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 RACGAP1Q9H0H5 632 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 OR2AG1Q9H205 316 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 CHMP4BQ9H444 224 aaKnown RBP2.29□□□□□ -2.04
UBR1-205ENST00000564540 RPP21Q9H633 154 aaKnown RBP2.29□□□□□ -2.04
UBR1-205ENST00000564540 NIPAL2Q9H841 368 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 NHEJ1Q9H9Q4 299 aaPredicted RBP2.29□□□□□ -2.04
UBR1-205ENST00000564540 UGT1A10Q9HAW8 530 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 LY9Q9HBG7 655 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 CHRAC1Q9NRG0 131 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 C20orf96Q9NUD7 363 aaPredicted RBP2.29□□□□□ -2.04
UBR1-205ENST00000564540 BFARQ9NZS9 450 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 TMCO1Q9UM00 188 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 RFNGQ9Y644 331 aa2.29□□□□□ -2.04
UBR1-205ENST00000564540 FANCIQ9NVI1 1328 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 LOC100653049A0A140TA62 436 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 CIB4A0PJX0 185 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 RRP8O43159 456 aaKnown RBP2.28□□□□□ -2.04
UBR1-205ENST00000564540 PSTPIP1O43586 416 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 CHST1O43916 411 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 KRT34O76011 436 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 VAMP5O95183 116 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 MPZL1O95297 269 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 SNAI1O95863 264 aaPredicted RBP2.28□□□□□ -2.04
UBR1-205ENST00000564540 CLTAP09496 248 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 STAG3L2P0CL84 134 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 DCKP27707 260 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 GTF2E2P29084 291 aaKnown RBP2.28□□□□□ -2.04
UBR1-205ENST00000564540 HSD17B2P37059 387 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 UQCRFS1P47985 274 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 SLC7A9P82251 487 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 SYCNQ0VAF6 134 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 SELENBP1Q13228 472 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 VPS26BQ4G0F5 336 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 TWF2Q6IBS0 349 aaKnown RBP2.28□□□□□ -2.04
UBR1-205ENST00000564540 SLC25A48Q6ZT89 311 aaKnown RBP2.28□□□□□ -2.04
UBR1-205ENST00000564540 UTS2BQ765I0 119 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 ASCL5Q7RTU5 278 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 PIANPQ8IYJ0 282 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 RHEBL1Q8TAI7 183 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 MITD1Q8WV92 249 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 RAB1CQ92928 201 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 RBMXL1Q96E39 390 aaKnown RBP2.28□□□□□ -2.04
UBR1-205ENST00000564540 FOXC2Q99958 501 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 GABARAPL3Q9BY60 117 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms