RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 FASLGP48023 281 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 NPY4RP50391 375 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 ATP1B3P54709 279 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 TMEM241Q24JQ0 296 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 SUSD1Q6UWL2 747 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 ZNF687Q8N1G0 1237 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 LMX1AQ8TE12 382 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 ZNF845Q96IR2 970 aaPredicted RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 NAA11Q9BSU3 229 aaPredicted RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 TMEM121BQ9BXQ6 578 aaPredicted RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 SLC25A37Q9NYZ2 338 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 TBC1D3KA0A087X1G2 549 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 TRBV11-1A0A0K0K1C0 115 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 TBC1D3BA6NDS4 549 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 TBC1D3FA6NER0 549 aaPredicted RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 H0YIV9 168 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 CD3DP04234 171 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 SEC11BP0C7V7 166 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 MMP16P51512 607 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 TBC1D3GQ6DHY5 549 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 VWA1Q6PCB0 445 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 OGFOD3Q6PK18 319 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 EGLN2Q96KS0 407 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 BMFQ96LC9 184 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 TBX15Q96SF7 602 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 TRMT61BQ9BVS5 477 aaKnown RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 SEMA6CQ9H3T2 930 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 PLEKHJ1Q9NW61 149 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 LHX3Q9UBR4 397 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 FOXJ3Q9UPW0 622 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 H0Y8G0 127 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 ITGB1BP1O14713 200 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 IGF2P01344 180 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 CRHP06850 196 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 STAG3L3P0CL85 134 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 HOXA9P31269 272 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 WASP42768 502 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 MTCP1P56278 107 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 LANCL3Q6ZV70 420 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 TOMM40LQ969M1 308 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 TRMT61AQ96FX7 289 aaKnown RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 FAM103A1Q9BTL3 118 aaKnown RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 C2orf42Q9NWW7 574 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 HECAQ9UBI9 543 aaPredicted RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 CCDC88CQ9P219 2028 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 GPANK1O95872 356 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 ARG1P05089 322 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 ASGR2P07307 311 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 ZNF728P0DKX0 622 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 HNRNPA2B1P22626 353 aaKnown RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 HOXC13P31276 330 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 SLC24A5Q71RS6 500 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 ACVR1CQ8NER5 493 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 IFI44Q8TCB0 444 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 APH1AQ96BI3 265 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 FBXO17Q96EF6 278 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 GMPPAQ96IJ6 420 aaPredicted RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 TMEM59Q9BXS4 323 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 VCX2Q9H322 139 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 LTB4R2Q9NPC1 389 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 NPTNQ9Y639 398 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 A0A1W2PPE2 198 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 RECKO95980 971 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 OR5G3P0C626 314 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 SLC6A11P48066 632 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 CEBPDP49716 269 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 SUCLG1P53597 346 aaKnown RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 EXOSC6Q5RKV6 272 aaKnown RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 FBXL22Q6P050 247 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TNFRSF14Q92956 283 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 BARHL1Q9BZE3 327 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TLNRD1Q9H1K6 362 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 IL19Q9UHD0 177 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 KCNE5Q9UJ90 142 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 H3BQ15 152 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 LDB2O43679 373 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 AKR7A3O95154 331 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 IGHV2-70P01814 119 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 RCC1P18754 421 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 FCARP24071 287 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 LY6KQ17RY6 165 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 OR10AD1Q8NGE0 317 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 OR4F5Q8NH21 305 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 OR51Q1Q8NH59 317 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 ASB11Q8WXH4 323 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 OR4F4Q96R69 305 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 PELI2Q9HAT8 420 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 CBLN4Q9NTU7 201 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TIMM8BQ9Y5J9 83 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 ZFP37Q9Y6Q3 630 aaPredicted RBP5.73□□□□□ -1.49
CLK3-212ENST00000563418 TBC1D3DA0A087WVF3 549 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TBC1D3IA0A087WXS9 549 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 GAGE10A6NGK3 116 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TBC1D3LB9A6J9 549 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 LIMS3P0CW19 117 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 LIMS4P0CW20 117 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 TFPIP10646 304 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 MPGP29372 298 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 BPIFB3P59826 476 aa5.73□□□□□ -1.49
CLK3-212ENST00000563418 IKZF1Q13422 519 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms