RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 LMX1AQ8TE12 382 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 DVL3Q92997 716 aaPredicted RBP11.75□□□□□ -0.53
USB1-207ENST00000563149 WWTR1Q9GZV5 400 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 SLC2A8Q9NY64 477 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 COPS7AQ9UBW8 275 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 LAMA2P24043 3122 aaKnown RBP11.75□□□□□ -0.53
USB1-207ENST00000563149 AMY2AP04746 511 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 SLC25A4P12235 298 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 NAGAP17050 411 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 OR1D4P47884 311 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 PPM1FP49593 454 aaPredicted RBP11.74□□□□□ -0.53
USB1-207ENST00000563149 SORDQ00796 357 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 OC90Q02509 493 aaPredicted RBP11.74□□□□□ -0.53
USB1-207ENST00000563149 PMPCAQ10713 525 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 KCNAB1Q14722 419 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 PCK2Q16822 640 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 OGFOD3Q6PK18 319 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.74□□□□□ -0.53
USB1-207ENST00000563149 ZNF441Q8N8Z8 693 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 OR1N1Q8NGS0 311 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 OR13C3Q8NGS6 347 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 DUSP19Q8WTR2 217 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 TMEM234Q8WY98 164 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 PPP1R14AQ96A00 147 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 DNTTIP1Q9H147 329 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 OR52A1Q9UKL2 312 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 RAB22AQ9UL26 194 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 COA3Q9Y2R0 106 aaPredicted RBP11.74□□□□□ -0.53
USB1-207ENST00000563149 MRPS18BQ9Y676 258 aaKnown RBP11.74□□□□□ -0.53
USB1-207ENST00000563149 CPAMD8Q8IZJ3 1885 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 CHD9Q3L8U1 2897 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 TRAV14DV4A0A0A6YYC5 116 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 A0A1B0GTI1 187 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.74□□□□□ -0.53
USB1-207ENST00000563149 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.74□□□□□ -0.53
USB1-207ENST00000563149 METTL21EPA6NDL7 271 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 ZNF736B4DX44 427 aaPredicted RBP11.74□□□□□ -0.53
USB1-207ENST00000563149 D6RAR5 112 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 SCGNO76038 276 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 HPP00738 406 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 HLA-GP17693 338 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 MAOBP27338 520 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 ABCD3P28288 659 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 UBE2MP61081 183 aaKnown RBP11.74□□□□□ -0.53
USB1-207ENST00000563149 ZP2Q05996 745 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 TDGQ13569 410 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 ZNF345Q14585 488 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 TUSC1Q2TAM9 212 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 LY6G6FQ5SQ64 297 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 PXDC1Q5TGL8 231 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 LIN54Q6MZP7 749 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 TMEM81Q6P7N7 255 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 ZNF546Q86UE3 836 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 LYPD6Q86Y78 171 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 BEST3Q8N1M1 668 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 BPIFB2Q8N4F0 458 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 STEAP2Q8NFT2 490 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 OR5M8Q8NGP6 311 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 OR1S1Q8NH92 325 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 CMKLR1Q99788 373 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 PRRT1Q99946 306 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 KCNK15Q9H427 330 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 G6PC2Q9NQR9 355 aa11.74□□□□□ -0.53
USB1-207ENST00000563149 GPN3Q9UHW5 284 aaPredicted RBP11.74□□□□□ -0.53
USB1-207ENST00000563149 THADAQ6YHU6 1953 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 MKI67P46013 3256 aaKnown RBP11.73□□□□□ -0.53
USB1-207ENST00000563149 FTCDNL1E5RQL4 147 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 GMFGO60234 142 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 SDC3O75056 442 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 OR2F2O95006 317 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 FBLP22087 321 aaKnown RBP11.73□□□□□ -0.53
USB1-207ENST00000563149 CD96P40200 585 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 DAP3P51398 398 aaKnown RBP11.73□□□□□ -0.53
USB1-207ENST00000563149 OR2F1Q13607 317 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 ETFDHQ16134 617 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 ATPAF1Q5TC12 328 aaPredicted RBP11.73□□□□□ -0.53
USB1-207ENST00000563149 ZNF584Q8IVC4 421 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 GALNT16Q8N428 558 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 KCNRGQ8N5I3 272 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 ZDHHC22Q8N966 263 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 SLC26A10Q8NG04 563 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 FOXN4Q96NZ1 517 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 NRSN2Q9GZP1 204 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 ZNF304Q9HCX3 659 aa11.73□□□□□ -0.53
USB1-207ENST00000563149 LOC107986453A0A1B0GWG9 222 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 CDC14CA4D256 554 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 SHISA7A6NL88 538 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 RAD1O60671 282 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 ZNF217O75362 1048 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 HSD11B1P28845 292 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 CD34P28906 385 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 CD38P28907 300 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 GSK3AP49840 483 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 HSD11B2P80365 405 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 NSDHLQ15738 373 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 FAHD2BQ6P2I3 314 aaPredicted RBP11.72□□□□□ -0.53
USB1-207ENST00000563149 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.72□□□□□ -0.53
USB1-207ENST00000563149 PXT1Q8NFP0 134 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 MFSD8Q8NHS3 518 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms