RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 POLR1DQ9Y2S0 133 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 LHFPL6Q9Y693 200 aa14.43□□□□□ -0.1
CLK3-207ENST00000562389 LOC100509620A0A075B734 347 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 VSTM5A8MXK1 200 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 MITFO75030 526 aaPredicted RBP14.42□□□□□ -0.1
CLK3-207ENST00000562389 HLA-DQA2P01906 255 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 OR4A8P0C604 315 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 PAICSP22234 425 aaKnown RBP14.42□□□□□ -0.1
CLK3-207ENST00000562389 IGFBP5P24593 272 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 SERPINF1P36955 418 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 GDI2P50395 445 aaKnown RBP14.42□□□□□ -0.1
CLK3-207ENST00000562389 HIST1H3AP68431 136 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 SWI5Q1ZZU3 235 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 MST1LQ2TV78 715 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 HIST2H3PS2Q5TEC6 136 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 TMEM236Q5W0B7 351 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 HIST2H3AQ71DI3 136 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 VASH1Q7L8A9 365 aaPredicted RBP14.42□□□□□ -0.1
CLK3-207ENST00000562389 ZNRF4Q8WWF5 429 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 RBM4BQ9BQ04 359 aaKnown RBP14.42□□□□□ -0.1
CLK3-207ENST00000562389 PLEK2Q9NYT0 353 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 ATPIF1Q9UII2 106 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 CCDC168Q8NDH2 2452 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 TEX15Q9BXT5 2789 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 MYO9AB2RTY4 2548 aa14.42□□□□□ -0.1
CLK3-207ENST00000562389 CREBBPQ92793 2442 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 C5orf49A4QMS7 147 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 B9A039 149 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 RER1O15258 196 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 SYNGR3O43761 229 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 GPRIN2O60269 458 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 ICMTO60725 284 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 GYPBP06028 91 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 CLUP10909 449 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 GGT2P36268 569 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 CDKN1AP38936 164 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 BLVRAP53004 296 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 PTGES3Q15185 160 aaKnown RBP14.41□□□□□ -0.1
CLK3-207ENST00000562389 RAB35Q15286 201 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 CCDC92Q53HC0 331 aaPredicted RBP14.41□□□□□ -0.1
CLK3-207ENST00000562389 SLC18B1Q6NT16 456 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 SPNS3Q6ZMD2 512 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.41□□□□□ -0.1
CLK3-207ENST00000562389 GJC3Q8NFK1 279 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 OR51L1Q8NGJ5 315 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 TRMT61AQ96FX7 289 aaKnown RBP14.41□□□□□ -0.1
CLK3-207ENST00000562389 PERPQ96FX8 193 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 CIB1Q99828 191 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 HCAR1Q9BXC0 346 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 CACNG6Q9BXT2 260 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 BCL2L14Q9BZR8 327 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 CYB5R1Q9UHQ9 305 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 CMAHPQ9Y471 501 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 ARFGEF3Q5TH69 2177 aa14.41□□□□□ -0.1
CLK3-207ENST00000562389 ARID1AO14497 2285 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 RTTNQ86VV8 2226 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 OR6C6A6NF89 314 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 FAM183AA6NL82 134 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 ZAR1LA6NP61 321 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 PRR23D1E9PI22 279 aaPredicted RBP14.4□□□□□ -0.1
CLK3-207ENST00000562389 H7C417 338 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 FAM157BP0CG42 384 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 PRR23D2P0DMB1 279 aaPredicted RBP14.4□□□□□ -0.1
CLK3-207ENST00000562389 BMP4P12644 408 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 ZNF823P16415 610 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 CCNOP22674 350 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 FMO3P31513 532 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 WNT5AP41221 380 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 RAD52P43351 418 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 HTR5AP47898 357 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 UCP2P55851 309 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 SNRPD2P62316 118 aaKnown RBP14.4□□□□□ -0.1
CLK3-207ENST00000562389 ADAM8P78325 824 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 MSMPQ1L6U9 139 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 LINC01590Q5TEZ4 76 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 SHEQ5VZ18 495 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 LYPD4Q6UWN0 246 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 KRTAP1-3Q8IUG1 177 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 PQLC1Q8N2U9 271 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 OR1F12Q8NHA8 337 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 PTP4A1Q93096 173 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 MRPL24Q96A35 216 aaKnown RBP14.4□□□□□ -0.1
CLK3-207ENST00000562389 PLEKHA8Q96JA3 519 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 CDADC1Q9BWV3 514 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 GABARAPL3Q9BY60 117 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 PRRG3Q9BZD7 231 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 HDHD2Q9H0R4 259 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 PLK3Q9H4B4 646 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 MED20Q9H944 212 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 USE1Q9NZ43 259 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 FBXO9Q9UK97 447 aaPredicted RBP14.4□□□□□ -0.1
CLK3-207ENST00000562389 COMMD3-BMI1R4GMX3 469 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 AKAP9Q99996 3911 aa14.4□□□□□ -0.1
CLK3-207ENST00000562389 USF3Q68DE3 2245 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 TVP23AA6NH52 213 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 GLCEO94923 617 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 EVX1P49640 407 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 ATP5J2P56134 94 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 SNAPC1Q16533 368 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 PCK2Q16822 640 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms