RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 A6NCN8 305 aa12.01□□□□□ -0.49
CLK3-206ENST00000562078 M0R036 132 aa12.01□□□□□ -0.49
CLK3-206ENST00000562078 GLSO94925 669 aaPredicted RBP12.01□□□□□ -0.49
CLK3-206ENST00000562078 CHRM4P08173 479 aa12.01□□□□□ -0.49
CLK3-206ENST00000562078 F3P13726 295 aa12.01□□□□□ -0.49
CLK3-206ENST00000562078 CD34P28906 385 aa12.01□□□□□ -0.49
CLK3-206ENST00000562078 CDK5R1Q15078 307 aa12.01□□□□□ -0.49
CLK3-206ENST00000562078 ZNF574Q6ZN55 896 aaPredicted RBP12.01□□□□□ -0.49
CLK3-206ENST00000562078 PATE1Q8WXA2 126 aa12.01□□□□□ -0.49
CLK3-206ENST00000562078 NCDNQ9UBB6 729 aa12.01□□□□□ -0.49
CLK3-206ENST00000562078 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
CLK3-206ENST00000562078 MFNGO00587 321 aa12□□□□□ -0.49
CLK3-206ENST00000562078 IGLV3-19P01714 112 aa12□□□□□ -0.49
CLK3-206ENST00000562078 RAB40ALP0C0E4 278 aa12□□□□□ -0.49
CLK3-206ENST00000562078 ZNF888P0CJ79 500 aaPredicted RBP12□□□□□ -0.49
CLK3-206ENST00000562078 LPAR6P43657 344 aa12□□□□□ -0.49
CLK3-206ENST00000562078 ID4P47928 161 aa12□□□□□ -0.49
CLK3-206ENST00000562078 KHKP50053 298 aa12□□□□□ -0.49
CLK3-206ENST00000562078 PRKXP51817 358 aa12□□□□□ -0.49
CLK3-206ENST00000562078 BTN3A2P78410 334 aa12□□□□□ -0.49
CLK3-206ENST00000562078 DHRS2Q13268 280 aa12□□□□□ -0.49
CLK3-206ENST00000562078 GPR18Q14330 331 aa12□□□□□ -0.49
CLK3-206ENST00000562078 LASP1Q14847 261 aaKnown RBP12□□□□□ -0.49
CLK3-206ENST00000562078 HYAL4Q2M3T9 481 aa12□□□□□ -0.49
CLK3-206ENST00000562078 KIAA0895LQ68EN5 471 aa12□□□□□ -0.49
CLK3-206ENST00000562078 ARL14Q8N4G2 192 aa12□□□□□ -0.49
CLK3-206ENST00000562078 FAM160A2Q8N612 972 aaPredicted RBP12□□□□□ -0.49
CLK3-206ENST00000562078 FRMD1Q8N878 549 aa12□□□□□ -0.49
CLK3-206ENST00000562078 RAB40AQ8WXH6 277 aa12□□□□□ -0.49
CLK3-206ENST00000562078 MALSU1Q96EH3 234 aa12□□□□□ -0.49
CLK3-206ENST00000562078 PELI1Q96FA3 418 aa12□□□□□ -0.49
CLK3-206ENST00000562078 TCTN2Q96GX1 697 aa12□□□□□ -0.49
CLK3-206ENST00000562078 KIRREL1Q96J84 757 aa12□□□□□ -0.49
CLK3-206ENST00000562078 MFRPQ9BY79 579 aa12□□□□□ -0.49
CLK3-206ENST00000562078 INPP5EQ9NRR6 644 aa12□□□□□ -0.49
CLK3-206ENST00000562078 DOK5Q9P104 306 aa12□□□□□ -0.49
CLK3-206ENST00000562078 DNAJB11Q9UBS4 358 aa12□□□□□ -0.49
CLK3-206ENST00000562078 SPTBP11277 2137 aa12□□□□□ -0.49
CLK3-206ENST00000562078 TRBV2A0A0J9YWF9 115 aa12□□□□□ -0.49
CLK3-206ENST00000562078 GXYLT2A0PJZ3 443 aa12□□□□□ -0.49
CLK3-206ENST00000562078 MARCH11A6NNE9 402 aa12□□□□□ -0.49
CLK3-206ENST00000562078 ZNF217O75362 1048 aa12□□□□□ -0.49
CLK3-206ENST00000562078 IFNA17P01571 189 aa12□□□□□ -0.49
CLK3-206ENST00000562078 ITGB2P05107 769 aa12□□□□□ -0.49
CLK3-206ENST00000562078 IGHV4-34P06331 123 aa12□□□□□ -0.49
CLK3-206ENST00000562078 CSF1P09603 554 aa12□□□□□ -0.49
CLK3-206ENST00000562078 AKAIN1P0CW23 69 aa12□□□□□ -0.49
CLK3-206ENST00000562078 VCANP13611 3396 aa12□□□□□ -0.49
CLK3-206ENST00000562078 PPP2R1BP30154 601 aa12□□□□□ -0.49
CLK3-206ENST00000562078 PSMB10P40306 273 aa12□□□□□ -0.49
CLK3-206ENST00000562078 RBM34P42696 430 aaKnown RBP12□□□□□ -0.49
CLK3-206ENST00000562078 RPS15AP62244 130 aaKnown RBP12□□□□□ -0.49
CLK3-206ENST00000562078 MEF2DQ14814 521 aa12□□□□□ -0.49
CLK3-206ENST00000562078 NR0B2Q15466 257 aa12□□□□□ -0.49
CLK3-206ENST00000562078 GFI1BQ5VTD9 330 aa12□□□□□ -0.49
CLK3-206ENST00000562078 SLC48A1Q6P1K1 146 aa12□□□□□ -0.49
CLK3-206ENST00000562078 DNM1P46Q6ZS02 220 aa12□□□□□ -0.49
CLK3-206ENST00000562078 Q6ZSR6 202 aa12□□□□□ -0.49
CLK3-206ENST00000562078 NRROSQ86YC3 692 aa12□□□□□ -0.49
CLK3-206ENST00000562078 CYB561A3Q8NBI2 242 aa12□□□□□ -0.49
CLK3-206ENST00000562078 OR13H1Q8NG92 308 aa12□□□□□ -0.49
CLK3-206ENST00000562078 OR56B1Q8NGI3 324 aa12□□□□□ -0.49
CLK3-206ENST00000562078 OR9A2Q8NGT5 310 aa12□□□□□ -0.49
CLK3-206ENST00000562078 OR6X1Q8NH79 312 aa12□□□□□ -0.49
CLK3-206ENST00000562078 FLVCR1-AS1Q8TAF5 88 aa12□□□□□ -0.49
CLK3-206ENST00000562078 ZCCHC10Q8TBK6 192 aa12□□□□□ -0.49
CLK3-206ENST00000562078 DIO2Q92813 273 aa12□□□□□ -0.49
CLK3-206ENST00000562078 MIB2Q96AX9 1013 aa12□□□□□ -0.49
CLK3-206ENST00000562078 ACTRT3Q9BYD9 372 aa12□□□□□ -0.49
CLK3-206ENST00000562078 TUBA4BQ9H853 241 aa12□□□□□ -0.49
CLK3-206ENST00000562078 CYTL1Q9NRR1 136 aa12□□□□□ -0.49
CLK3-206ENST00000562078 GDF2Q9UK05 429 aaPredicted RBP12□□□□□ -0.49
CLK3-206ENST00000562078 TMEM184BQ9Y519 407 aaPredicted RBP12□□□□□ -0.49
CLK3-206ENST00000562078 V9GY05 133 aa12□□□□□ -0.49
CLK3-206ENST00000562078 LOC100509620A0A075B734 347 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 TNFRSF10CO14798 259 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 ZNF208O43345 1280 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 KLF4O43474 513 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 THY1P04216 161 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 HMGN2P05204 90 aaKnown RBP11.99□□□□□ -0.49
CLK3-206ENST00000562078 ITGA5P08648 1049 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 FXYD6P3P58550 94 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 FUT5Q11128 374 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 PPA1Q15181 289 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 PRAMEF17Q5VTA0 474 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 FRRS1Q6ZNA5 592 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 TTLL10Q6ZVT0 673 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 ANGPTL5Q86XS5 388 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 SFTPA2Q8IWL1 248 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 CARFQ8N187 725 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 SLC22A18ASQ8N1D0 253 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 CCDC107Q8WV48 283 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 GAL3ST3Q96A11 431 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 ZG16BQ96DA0 208 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 METTL9Q9H1A3 318 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 TCEAL2Q9H3H9 227 aaPredicted RBP11.99□□□□□ -0.49
CLK3-206ENST00000562078 STEAP1Q9UHE8 339 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 CES1P1Q9UKY3 287 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 A0A087WV48 116 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 ZNF726A6NNF4 738 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms