RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 COMMD1Q8N668 190 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 ARL14EPQ8N8R7 260 aaPredicted RBP16.86■□□□□ 0.29
RAB40C-206ENST00000561781 DVL3Q92997 716 aaPredicted RBP16.86■□□□□ 0.29
RAB40C-206ENST00000561781 ALG14Q96F25 216 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 MYADMQ96S97 322 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 PHB2Q99623 299 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 SNHG12Q9BXW3 62 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 NCOR1P1Q9H4R4 102 aa16.86■□□□□ 0.29
RAB40C-206ENST00000561781 PRICKLE3O43900 615 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-206ENST00000561781 GYPBP06028 91 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 TEAD1P28347 426 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 PPICP45877 212 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 DHPSP49366 369 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-206ENST00000561781 KHKP50053 298 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 JOSD1Q15040 202 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-206ENST00000561781 PDZD11Q5EBL8 140 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 NXPE4Q6UWF7 544 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 TTLL10Q6ZVT0 673 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 LYG2Q86SG7 212 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 FGF13Q92913 245 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 SCAMP4Q969E2 229 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 WDR92Q96MX6 357 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 DPH1Q9BZG8 443 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 OR14J1Q9UGF5 321 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 STARD10Q9Y365 291 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 KCNE3Q9Y6H6 103 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 WDFY4Q6ZS81 3184 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 NUP210Q8TEM1 1887 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-206ENST00000561781 C9J4A7 227 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 UMAD1C9J7I0 102 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 DVL1O14640 695 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 BNIP3LO60238 219 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 LRP3O75074 770 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 RPS2P15880 293 aaKnown RBP16.85■□□□□ 0.29
RAB40C-206ENST00000561781 GNALP38405 381 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 MRPS11P82912 194 aaKnown RBP16.85■□□□□ 0.29
RAB40C-206ENST00000561781 LASP1Q14847 261 aaKnown RBP16.85■□□□□ 0.29
RAB40C-206ENST00000561781 DCAF10Q5QP82 559 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 GFI1BQ5VTD9 330 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 C5orf24Q7Z6I8 188 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 UBE3DQ7Z6J8 389 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 ZNF227Q86WZ6 799 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 OR9A4Q8NGU2 314 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 OR13D1Q8NGV5 346 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 MITD1Q8WV92 249 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 PLD4Q96BZ4 506 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 SLC41A3Q96GZ6 507 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 PPP1R16AQ96I34 528 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 ZNF385AQ96PM9 386 aaKnown RBP16.85■□□□□ 0.29
RAB40C-206ENST00000561781 ZPBPQ9BS86 351 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 SLC46A2Q9BY10 475 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 CMC2Q9NRP2 79 aa16.85■□□□□ 0.29
RAB40C-206ENST00000561781 P2RX6O15547 441 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 SERPINA5P05154 406 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 DCNP07585 359 aaKnown RBP16.84■□□□□ 0.29
RAB40C-206ENST00000561781 PPM1FP49593 454 aaPredicted RBP16.84■□□□□ 0.29
RAB40C-206ENST00000561781 GUCA2AQ02747 115 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 ISXQ2M1V0 245 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 ANKRD16Q6P6B7 361 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 DCXRQ7Z4W1 244 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 TRAM1L1Q8N609 369 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 DCAF4L2Q8NA75 395 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 LYPD6BQ8NI32 183 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 NTNG2Q96CW9 530 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 DNAJB11Q9UBS4 358 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 MRPS18CQ9Y3D5 142 aaKnown RBP16.84■□□□□ 0.29
RAB40C-206ENST00000561781 TBX19O60806 448 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 CYCSP99999 105 aaKnown RBP16.84■□□□□ 0.29
RAB40C-206ENST00000561781 NR0B2Q15466 257 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 ODF4Q2M2E3 257 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 KHDRBS2Q5VWX1 349 aaKnown RBP16.84■□□□□ 0.29
RAB40C-206ENST00000561781 ACOT4Q8N9L9 421 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 CYB561A3Q8NBI2 242 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 GLIPR2Q9H4G4 154 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 OR2S2Q9NQN1 319 aa16.84■□□□□ 0.29
RAB40C-206ENST00000561781 DOCK8Q8NF50 2099 aa16.83■□□□□ 0.29
RAB40C-206ENST00000561781 UNC119BA6NIH7 251 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 EEF1E1-BLOC1S5C9J1V9 151 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 TBX6O95947 436 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-206ENST00000561781 NPSP0C0P6 89 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 OR8U9P0C7N5 309 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 ZBTB25P24278 435 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 PBLDP30039 288 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-206ENST00000561781 MAPK8P45983 427 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 TDGF1P3P51864 188 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 YOD1Q5VVQ6 348 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-206ENST00000561781 PTCRAQ6ISU1 281 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-206ENST00000561781 ZSCAN4Q8NAM6 433 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-206ENST00000561781 TMEM229BQ8NBD8 167 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 OR8U1Q8NH10 309 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 RRNAD1Q96FB5 475 aaKnown RBP16.83■□□□□ 0.28
RAB40C-206ENST00000561781 AMDHD1Q96NU7 426 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 MCHR1Q99705 422 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 AHSPQ9NZD4 102 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 SLC7A7Q9UM01 511 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 OBSL1O75147 1896 aa16.83■□□□□ 0.28
RAB40C-206ENST00000561781 AMY2AP04746 511 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 CKMP06732 381 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 VIPR2P41587 438 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 MOGAT2Q3SYC2 334 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms