RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 HSF2Q03933 536 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 VWA1Q6PCB0 445 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 KCTD18Q6PI47 426 aaPredicted RBP10.35□□□□□ -0.75
LDLR-212ENST00000560467 FAM214BQ7L5A3 538 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 SLC16A9Q7RTY1 509 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 ERI1Q8IV48 349 aaKnown RBP10.35□□□□□ -0.75
LDLR-212ENST00000560467 CNEP1R1Q8N9A8 125 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 ZNF454Q8N9F8 522 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 ZIC4Q8N9L1 334 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 RORBQ92753 470 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 MCHR2Q969V1 340 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 DOCK7Q96N67 2140 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 DDOQ99489 341 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 CDCA4Q9BXL8 241 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 LINC00470Q9BZP3 86 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 SLCO5A1Q9H2Y9 848 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 FGF20Q9NP95 211 aaPredicted RBP10.35□□□□□ -0.75
LDLR-212ENST00000560467 NDRG3Q9UGV2 375 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 KCNG2Q9UJ96 466 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 LAMP5Q9UJQ1 280 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 CLEC4AQ9UMR7 237 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 EXOGQ9Y2C4 368 aaKnown RBP10.35□□□□□ -0.75
LDLR-212ENST00000560467 COA3Q9Y2R0 106 aaPredicted RBP10.35□□□□□ -0.75
LDLR-212ENST00000560467 ROS1P08922 2347 aa10.35□□□□□ -0.75
LDLR-212ENST00000560467 FREM3P0C091 2139 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 FBN1P35555 2871 aaKnown RBP10.34□□□□□ -0.75
LDLR-212ENST00000560467 C12orf71A8MTZ7 269 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 ZNF593O00488 134 aaPredicted RBP10.34□□□□□ -0.75
LDLR-212ENST00000560467 MSTNO14793 375 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 DHHO43323 396 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 SS18L1O75177 396 aaPredicted RBP10.34□□□□□ -0.75
LDLR-212ENST00000560467 ZNF432O94892 652 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 SBK2P0C263 348 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 CLUP10909 449 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 SLC2A5P22732 501 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 SLC15A1P46059 708 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 RPL5P46777 297 aaKnown RBP10.34□□□□□ -0.75
LDLR-212ENST00000560467 SELENOPP49908 381 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 ENTPD1P49961 510 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 CDH15P55291 814 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 PCBD1P61457 104 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 ACTA2P62736 377 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 ACTG2P63267 376 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 RUNX1T1Q06455 604 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 GGTLC2Q14390 218 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 STK11Q15831 433 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 SGCAQ16586 387 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 HIST3H3Q16695 136 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 RNLSQ5VYX0 342 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 LAIR2Q6ISS4 152 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 SLC18B1Q6NT16 456 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 ZNF544Q6NX49 715 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 ZNF474Q6S9Z5 364 aaPredicted RBP10.34□□□□□ -0.75
LDLR-212ENST00000560467 PRSS57Q6UWY2 283 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 KCTD8Q6ZWB6 473 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 FAM220AQ7Z4H9 259 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 KCTD20Q7Z5Y7 419 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.34□□□□□ -0.75
LDLR-212ENST00000560467 EGFL6Q8IUX8 553 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 SLC35F2Q8IXU6 374 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 TMEM123Q8N131 208 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 KLHL36Q8N4N3 616 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 OR52I1Q8NGK6 324 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 HAVCR2Q8TDQ0 301 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 ASB17Q8WXJ9 295 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 TMEM54Q969K7 222 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 STARD4Q96DR4 205 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 TSSK2Q96PF2 358 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 MED18Q9BUE0 208 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 HCAR1Q9BXC0 346 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 OPN3Q9H1Y3 402 aaPredicted RBP10.34□□□□□ -0.75
LDLR-212ENST00000560467 BATF3Q9NR55 127 aa10.34□□□□□ -0.75
LDLR-212ENST00000560467 CNOT4O95628 575 aaKnown RBP10.33□□□□□ -0.76
LDLR-212ENST00000560467 MRPL3P09001 348 aaKnown RBP10.33□□□□□ -0.76
LDLR-212ENST00000560467 SPARCP09486 303 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 CTLA4P16410 223 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 CRYGSP22914 178 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 LOXP28300 417 aaPredicted RBP10.33□□□□□ -0.76
LDLR-212ENST00000560467 AGTR1P30556 359 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 TTKP33981 857 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 CD79BP40259 229 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 NAA10P41227 235 aaPredicted RBP10.33□□□□□ -0.76
LDLR-212ENST00000560467 SH3BGRP55822 239 aaPredicted RBP10.33□□□□□ -0.76
LDLR-212ENST00000560467 SIRPAP78324 504 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 NEDD8Q15843 81 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 C10orf128Q5T292 105 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 NHLRC1Q6VVB1 395 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 PLEKHG7Q6ZR37 379 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 BTLAQ7Z6A9 289 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 LSRQ86X29 649 aaPredicted RBP10.33□□□□□ -0.76
LDLR-212ENST00000560467 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.33□□□□□ -0.76
LDLR-212ENST00000560467 SPARTQ8N0X7 666 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 ZNF511Q8NB15 262 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 OR4F15Q8NGB8 312 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 OR6K3Q8NGY3 331 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 OR6N2Q8NGY6 317 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 ZC3HAV1LQ96H79 300 aaKnown RBP10.33□□□□□ -0.76
LDLR-212ENST00000560467 C12orf49Q9H741 205 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 WDR76Q9H967 626 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 CRLF2Q9HC73 371 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms