RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 POLEQ07864 2286 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 ATRXP46100 2492 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 TRBV2A0A0J9YWF9 115 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 ZNF878C9JN71 531 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 ABHD16AO95870 558 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 SERPINA3P01011 423 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 HLA-DPB1P04440 258 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 H2BFMP0C1H6 154 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 OR8G3PP0DMU2 310 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 PSKH1P11801 424 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 EDN3P14138 238 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 GADD45AP24522 165 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 MPGP29372 298 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 FGF9P31371 208 aaPredicted RBP7.58□□□□□ -1.2
TRAF3-209ENST00000560463 CDAP32320 146 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 CCR9P51686 369 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 HIST1H3AP68431 136 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 DOC2BQ14184 412 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 CDK5R1Q15078 307 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 CTF1Q16619 201 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 CNPY1Q3B7I2 92 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 C1orf185Q5T7R7 199 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 HIST2H3PS2Q5TEC6 136 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 LIPNQ5VXI9 398 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 FBXW9Q5XUX1 488 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 DMKNQ6E0U4 476 aaPredicted RBP7.58□□□□□ -1.2
TRAF3-209ENST00000560463 FDX2Q6P4F2 183 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 CD200R1LQ6Q8B3 271 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 PLXDC2Q6UX71 529 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 RPTNQ6XPR3 784 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 HIST2H3AQ71DI3 136 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 LINGO2Q7L985 606 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 NUFIP2Q7Z417 695 aaKnown RBP7.58□□□□□ -1.2
TRAF3-209ENST00000560463 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.58□□□□□ -1.2
TRAF3-209ENST00000560463 CD163Q86VB7 1156 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.58□□□□□ -1.2
TRAF3-209ENST00000560463 LINC00346Q8IVM7 164 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 SLC22A24Q8N4F4 322 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 RPS4Y2Q8TD47 263 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 SLAMF6Q96DU3 332 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 SMIM19Q96E16 107 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 WBP1Q96G27 269 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 ALKBH3Q96Q83 286 aaPredicted RBP7.58□□□□□ -1.2
TRAF3-209ENST00000560463 AMELYQ99218 206 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 ZNF416Q9BWM5 594 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 ELOVL3Q9HB03 270 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 EMC7Q9NPA0 242 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 ACOXLQ9NUZ1 547 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 SLCO1C1Q9NYB5 712 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 ASH2LQ9UBL3 628 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 MRM2Q9UI43 246 aaKnown RBP7.58□□□□□ -1.2
TRAF3-209ENST00000560463 ST6GALNAC2Q9UJ37 374 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 GDF2Q9UK05 429 aaPredicted RBP7.58□□□□□ -1.2
TRAF3-209ENST00000560463 CLEC4AQ9UMR7 237 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 ZNF835Q9Y2P0 537 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 GSTK1Q9Y2Q3 226 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 KLHDC2Q9Y2U9 406 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 SF3B6Q9Y3B4 125 aaKnown RBP7.58□□□□□ -1.2
TRAF3-209ENST00000560463 LRP12Q9Y561 859 aa7.58□□□□□ -1.2
TRAF3-209ENST00000560463 DIDO1Q9BTC0 2240 aaKnown RBP7.58□□□□□ -1.2
TRAF3-209ENST00000560463 HCFC1P51610 2035 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 TRDV1A0A1B0GX56 115 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 PRR32B1ATL7 298 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 IL2RAP01589 272 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 APOC1P02654 83 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 EDNRAP25101 427 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 OPRL1P41146 370 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 CRYBB2P43320 205 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 PER3P56645 1201 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 GRB2P62993 217 aaKnown RBP7.57□□□□□ -1.2
TRAF3-209ENST00000560463 TUBA1BP68363 451 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 TGFBR3Q03167 851 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 SCRN3Q0VDG4 424 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 FAPQ12884 760 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 ECH1Q13011 328 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 ALKBH1Q13686 389 aaKnown RBP7.57□□□□□ -1.2
TRAF3-209ENST00000560463 ENDOGQ14249 297 aaKnown RBP7.57□□□□□ -1.2
TRAF3-209ENST00000560463 ZNF829Q3KNS6 432 aaPredicted RBP7.57□□□□□ -1.2
TRAF3-209ENST00000560463 RTL6Q6ICC9 239 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 KLHL24Q6TFL4 600 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 PAMR1Q6UXH9 720 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 LRRN1Q6UXK5 716 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 GFRALQ6UXV0 394 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 USP43Q70EL4 1123 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 TUBA1AQ71U36 451 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 DPPA2Q7Z7J5 298 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 UBE2J2Q8N2K1 259 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 C9orf106Q8NAJ2 232 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 THRSPQ92748 146 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 ZNF837Q96EG3 531 aaPredicted RBP7.57□□□□□ -1.2
TRAF3-209ENST00000560463 MAP6Q96JE9 813 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 TTTY10Q9BZA0 68 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 NAA50Q9GZZ1 169 aaKnown RBP7.57□□□□□ -1.2
TRAF3-209ENST00000560463 COMMD4Q9H0A8 199 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 OR51E2Q9H255 320 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 C12orf49Q9H741 205 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 PLSCR4Q9NRQ2 329 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 ASF1BQ9NVP2 202 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 PTTG2Q9NZH5 202 aa7.57□□□□□ -1.2
TRAF3-209ENST00000560463 USP24Q9UPU5 2620 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms