RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SLC25A1P53007 311 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 RAP1BP61224 184 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 RAP1AP62834 184 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 ARF1P84077 181 aaKnown RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 ADORA2A-AS1P86434 159 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 RBPJQ06330 500 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 IL18R1Q13478 541 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 RNPS1Q15287 305 aaKnown RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 HIKESHIQ53FT3 197 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 NXNL2Q5VZ03 156 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 TMEM154Q6P9G4 183 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 ZNF474Q6S9Z5 364 aaPredicted RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 CFAP77Q6ZQR2 320 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 MEPCEQ7L2J0 689 aaKnown RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 ZBTB46Q86UZ6 589 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 CXorf67Q86X51 503 aaPredicted RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 TIGD4Q8IY51 512 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 SLC43A2Q8N370 569 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 LRRC18Q8N456 261 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 ZNF610Q8N9Z0 462 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 BVESQ8NE79 360 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 OR6N2Q8NGY6 317 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 C11orf40Q8WZ69 217 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 NABP1Q96AH0 204 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 APH1AQ96BI3 265 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 WBP1Q96G27 269 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 C20orf173Q96LM9 149 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 ADAD1Q96M93 576 aaKnown RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 DMRTA2Q96SC8 542 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 TEAD3Q99594 435 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 SH3GL3Q99963 347 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 RBM24Q9BX46 236 aaKnown RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 PRRG3Q9BZD7 231 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 CCDC90BQ9GZT6 254 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 NELFAQ9H3P2 528 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 SEC61A2Q9H9S3 476 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 ADGRL4Q9HBW9 690 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 POLE4Q9NR33 117 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 FKBP14Q9NWM8 211 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 PAQR5Q9NXK6 330 aaPredicted RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 CLEC2DQ9UHP7 191 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 PSORS1C1Q9UIG5 152 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 KCNG2Q9UJ96 466 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 RCE1Q9Y256 329 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 MEMO1Q9Y316 297 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 EMC9Q9Y3B6 208 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 COMMD3-BMI1R4GMX3 469 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 INTS1Q8N201 2190 aaKnown RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 ANKRD17O75179 2603 aaKnown RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 PHF3Q92576 2039 aaKnown RBP4.56□□□□□ -1.68
SPG11-220ENST00000559933 PNMA8CA0A1B0GUJ8 204 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 A0A1W2PQL4 384 aaPredicted RBP4.56□□□□□ -1.68
SPG11-220ENST00000559933 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 C12orf71A8MTZ7 269 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 ZNF587BE7ETH6 402 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 GPR171O14626 319 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 RER1O15258 196 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 AKAP8O43823 692 aaKnown RBP4.56□□□□□ -1.68
SPG11-220ENST00000559933 DOK2O60496 412 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 KHDRBS3O75525 346 aaKnown RBP4.56□□□□□ -1.68
SPG11-220ENST00000559933 GLCEO94923 617 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 LCKP06239 509 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 LYNP07948 512 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 ATP6V1B1P15313 513 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 EEF1B2P24534 225 aaKnown RBP4.56□□□□□ -1.68
SPG11-220ENST00000559933 CTSSP25774 331 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 LAP3P28838 519 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 CCKARP32238 428 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 SLC15A1P46059 708 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 OR3A2P47893 321 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 MTNR1AP48039 350 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 ADAM8P78325 824 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 ZNF85Q03923 595 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 ENDOGQ14249 297 aaKnown RBP4.56□□□□□ -1.68
SPG11-220ENST00000559933 SGCAQ16586 387 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 C10orf128Q5T292 105 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 RIPPLY2Q5TAB7 128 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 OR2G6Q5TZ20 316 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 FAM205BPQ63HN1 556 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 XAF1Q6GPH4 301 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 DPY19L4Q7Z388 723 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 MYPOPQ86VE0 399 aaPredicted RBP4.56□□□□□ -1.68
SPG11-220ENST00000559933 GID4Q8IVV7 300 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 SLC35F2Q8IXU6 374 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 GPR137CQ8N3F9 429 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 ZFP41Q8N8Y5 198 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 ZNF540Q8NDQ6 660 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 SLC26A10Q8NG04 563 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 OR10H4Q8NGA5 316 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 OR10S1Q8NGN2 331 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 OR6K3Q8NGY3 331 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 OR2T4Q8NH00 348 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 CNN2Q99439 309 aaKnown RBP4.56□□□□□ -1.68
SPG11-220ENST00000559933 FOXB1Q99853 325 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 COPS4Q9BT78 406 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 ZNF416Q9BWM5 594 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 C1QTNF6Q9BXI9 259 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 TEX12Q9BXU0 123 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 RACGAP1Q9H0H5 632 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms