RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 ZNF679Q8IYX0 411 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 RNF133Q8WVZ7 376 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 YIPF6Q96EC8 236 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 RBM38Q9H0Z9 239 aaKnown RBP10.7□□□□□ -0.7
HERC1-205ENST00000559886 TRIM36Q9NQ86 728 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 ACOXLQ9NUZ1 547 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 IKZF2Q9UKS7 526 aa10.7□□□□□ -0.7
HERC1-205ENST00000559886 E9PI62 339 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 H3BSA7 217 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 IL18BPO95998 194 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 WNT11O96014 354 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 ITGA5P08648 1049 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 TGFBR2P37173 567 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 SH3BGRP55822 239 aaPredicted RBP10.69□□□□□ -0.7
HERC1-205ENST00000559886 HIST1H3AP68431 136 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 PMPCAQ10713 525 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 TSTQ16762 297 aaKnown RBP10.69□□□□□ -0.7
HERC1-205ENST00000559886 HIST2H3PS2Q5TEC6 136 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 C9orf135Q5VTT2 229 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 DEGS2Q6QHC5 323 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 LRRN1Q6UXK5 716 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 HIST2H3AQ71DI3 136 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 RHOUQ7L0Q8 258 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 OR10S1Q8NGN2 331 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 FBXO17Q96EF6 278 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 SH3GL3Q99963 347 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 MROQ9BYG7 248 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 CEPT1Q9Y6K0 416 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 IGSF10Q6WRI0 2623 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 HSPB2A8KAH6 182 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 CCRL2O00421 344 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 RER1O15258 196 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 FARS2O95363 451 aaKnown RBP10.69□□□□□ -0.7
HERC1-205ENST00000559886 CTSSP25774 331 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 GTF2A1P52655 376 aaPredicted RBP10.69□□□□□ -0.7
HERC1-205ENST00000559886 GBX2P52951 348 aaPredicted RBP10.69□□□□□ -0.7
HERC1-205ENST00000559886 TAS2R43P59537 309 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 HSPB2Q16082 182 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 SSX1Q16384 188 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 LIPNQ5VXI9 398 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 KLHL24Q6TFL4 600 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 FAM220AQ7Z4H9 259 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 KRT77Q7Z794 578 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 SYT9Q86SS6 491 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 SKA3Q8IX90 412 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 PHC2Q8IXK0 858 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 YIPF7Q8N8F6 280 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 GJC3Q8NFK1 279 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 RNF166Q96A37 237 aaPredicted RBP10.69□□□□□ -0.7
HERC1-205ENST00000559886 SLAMF6Q96DU3 332 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 FUNDC2Q9BWH2 189 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 SFXN3Q9BWM7 321 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 ELOVL3Q9HB03 270 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 PROCRQ9UNN8 238 aa10.69□□□□□ -0.7
HERC1-205ENST00000559886 E9PLN8 166 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 ATXN7O15265 892 aaPredicted RBP10.68□□□□□ -0.7
HERC1-205ENST00000559886 ZNF254O75437 659 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 CD8BP10966 210 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 CD36P16671 472 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 OPRL1P41146 370 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 GPR107Q5VW38 600 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 LIPKQ5VXJ0 399 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 FOXB2Q5VYV0 432 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 SPATC1Q76KD6 591 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 HAVCR2Q8TDQ0 301 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 UFD1Q92890 307 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 VKORC1Q9BQB6 163 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 WACQ9BTA9 647 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 FAM192AQ9GZU8 254 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 PNRC2Q9NPJ4 139 aaKnown RBP10.68□□□□□ -0.7
HERC1-205ENST00000559886 SIRT4Q9Y6E7 314 aaPredicted RBP10.68□□□□□ -0.7
HERC1-205ENST00000559886 RTTNQ86VV8 2226 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 PCNX1Q96RV3 2341 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 KALRNO60229 2985 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 IGHV1-2P23083 117 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 TGM4P49221 684 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 MRPL28Q13084 256 aaKnown RBP10.68□□□□□ -0.7
HERC1-205ENST00000559886 GPR50Q13585 617 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 CCDC58Q4VC31 144 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 ANKRD16Q6P6B7 361 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 MYO7BQ6PIF6 2116 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 SLC16A14Q7RTX9 510 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 CLVS1Q8IUQ0 354 aaPredicted RBP10.68□□□□□ -0.7
HERC1-205ENST00000559886 GABRG1Q8N1C3 465 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 ZFP41Q8N8Y5 198 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 ZNF610Q8N9Z0 462 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 OR1K1Q8NGR3 316 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 CENPMQ9NSP4 180 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 NDUFB11Q9NX14 153 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 ST6GALNAC2Q9UJ37 374 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 SH3BGRL2Q9UJC5 107 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 GRIP1Q9Y3R0 1128 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 LRP12Q9Y561 859 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 NBASA2RRP1 2371 aa10.68□□□□□ -0.7
HERC1-205ENST00000559886 A0A0G2JNJ9 132 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 ZNF878C9JN71 531 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 OGG1O15527 345 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 CELP19835 753 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 COX5AP20674 150 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 PSMB10P40306 273 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms