RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 POU4F2Q12837 409 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 ECH1Q13011 328 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 RAB39AQ14964 217 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 MEP1BQ16820 701 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 TEX30Q5JUR7 227 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 ADAM5Q6NVV9 412 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 UGT2A3Q6UWM9 527 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 MEPCEQ7L2J0 689 aaKnown RBP8.76□□□□□ -1.01
USP3-216ENST00000559873 LINC00346Q8IVM7 164 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 OR4F15Q8NGB8 312 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 OR6N2Q8NGY6 317 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 PTP4A1Q93096 173 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 ZMYND19Q96E35 227 aaPredicted RBP8.76□□□□□ -1.01
USP3-216ENST00000559873 MNTQ99583 582 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 COQ7Q99807 217 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 TMEM204Q9BSN7 226 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 HCAR1Q9BXC0 346 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 RASSF4Q9H2L5 321 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 MARCH7Q9H992 704 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 NOX3Q9HBY0 568 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 MRPL22Q9NWU5 206 aaKnown RBP8.76□□□□□ -1.01
USP3-216ENST00000559873 CLN6Q9NWW5 311 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 CYB5R1Q9UHQ9 305 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 LHFPL6Q9Y693 200 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 TMEM14AQ9Y6G1 99 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 HSPE1-MOB4S4R3N1 261 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 FAM221AA4D161 298 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 OR6C6A6NF89 314 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 DPRXA6NFQ7 191 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 ZNF878C9JN71 531 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 E9PQ18 207 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 J3QW42 95 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 PHYHO14832 338 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 MPZL1O95297 269 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 GPANK1O95872 356 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 STOMP27105 288 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 HTR1FP30939 366 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 ATP6V1E1P36543 226 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 CAPGP40121 348 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 VHLP40337 213 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 SLC15A1P46059 708 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 EFNB1P98172 346 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 GGTLC2Q14390 218 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 OCLNQ16625 522 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 PCK2Q16822 640 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 ELFN2Q5R3F8 820 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 SLC25A30Q5SVS4 291 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 AADACL4Q5VUY2 407 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 SLC18B1Q6NT16 456 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 ZNF774Q6NX45 483 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 IZUMO2Q6UXV1 221 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 C20orf204Q6ZNR8 217 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 VASH1Q7L8A9 365 aaPredicted RBP8.75□□□□□ -1.01
USP3-216ENST00000559873 SLC16A9Q7RTY1 509 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 C1orf174Q8IYL3 243 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 C8orf59Q8N0T1 100 aaPredicted RBP8.75□□□□□ -1.01
USP3-216ENST00000559873 ZNF511Q8NB15 262 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 BBS1Q8NFJ9 593 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 KBTBD8Q8NFY9 601 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 OR1F12Q8NHA8 337 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 FGFBP3Q8TAT2 258 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 SPTSSAQ969W0 71 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 DCLRE1CQ96SD1 692 aaKnown RBP8.75□□□□□ -1.01
USP3-216ENST00000559873 MYCBPQ99417 103 aaPredicted RBP8.75□□□□□ -1.01
USP3-216ENST00000559873 TEAD3Q99594 435 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 ATF6BQ99941 703 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 HAO2Q9NYQ3 351 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 DNAJC27Q9NZQ0 273 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 EIF3KQ9UBQ5 218 aaKnown RBP8.75□□□□□ -1.01
USP3-216ENST00000559873 GDF2Q9UK05 429 aaPredicted RBP8.75□□□□□ -1.01
USP3-216ENST00000559873 ATP23Q9Y6H3 246 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 ABCA12Q86UK0 2595 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 ASH1LQ9NR48 2969 aaKnown RBP8.75□□□□□ -1.01
USP3-216ENST00000559873 PLCE1Q9P212 2302 aa8.75□□□□□ -1.01
USP3-216ENST00000559873 CENPEQ02224 2701 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 CADP27708 2225 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 IGHV2OR16-5A0A0B4J2B6 119 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 IRGMA1A4Y4 181 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 C5orf49A4QMS7 147 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 CCDC182A6NF36 153 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 ATP6V1G2-DDX39BF2Z307 99 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 ZNF593O00488 134 aaPredicted RBP8.74□□□□□ -1.01
USP3-216ENST00000559873 RER1O15258 196 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 SIAH2O43255 324 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 APOC1P02654 83 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 SCG5P05408 212 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 CELA3BP08861 270 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 CCNOP22674 350 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 APEX1P27695 318 aaKnown RBP8.74□□□□□ -1.01
USP3-216ENST00000559873 NAA10P41227 235 aaPredicted RBP8.74□□□□□ -1.01
USP3-216ENST00000559873 RGS6P49758 472 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 NUDT6P53370 316 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 AQP4P55087 323 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 GRB2P62993 217 aaKnown RBP8.74□□□□□ -1.01
USP3-216ENST00000559873 ACTC1P68032 377 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 ACTA1P68133 377 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 HIST1H3AP68431 136 aa8.74□□□□□ -1.01
USP3-216ENST00000559873 SNTB2Q13425 540 aaKnown RBP8.74□□□□□ -1.01
USP3-216ENST00000559873 EIF2B1Q14232 305 aaKnown RBP8.74□□□□□ -1.01
USP3-216ENST00000559873 TAF13Q15543 124 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms