RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, human

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABPB1-208	ENST00000558970	OR51G2	Q8NGK0	314 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	APH1B	Q8WW43	257 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	SLC7A6	Q92536	515 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	MARVELD3	Q96A59	401 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	TBX5	Q99593	518 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	NGB	Q9NPG2	151 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	OBP2B	Q9NPH6	170 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	PLEK2	Q9NYT0	353 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	KCNG2	Q9UJ96	466 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	GDF2	Q9UK05	429 aa	Predicted RBP	10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	MOK	Q9UQ07	419 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	CELSR2	Q9HCU4	2923 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	IQCM	A0A1B0GVH7	501 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	DPRX	A6NFQ7	191 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	SLC22A31	A6NKX4	558 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970		A6NNC1	897 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	DEFB108A	A8MXU0	73 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	ATP6V1G2-DDX39B	F2Z307	99 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970		H0YAE9	185 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	SGCE	O43556	437 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	PLAU	P00749	431 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	HOXB1	P14653	301 aa	Predicted RBP	10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	CBR1	P16152	277 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	GABRB1	P18505	474 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	ATP6V1E1	P36543	226 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	HTR5A	P47898	357 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	PCBD1	P61457	104 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	SNRPG	P62308	76 aa	Known RBP	10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	LSM6	P62312	80 aa	Known RBP	10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	PLP2	Q04941	152 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	SCRN3	Q0VDG4	424 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	MAD2L1BP	Q15013	274 aa	Predicted RBP	10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	KCNMB1	Q16558	191 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	SLC18B1	Q6NT16	456 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	SLC22A25	Q6T423	547 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	DCXR	Q7Z4W1	244 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	SETD9	Q8NE22	299 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	KBTBD8	Q8NFY9	601 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	TFAP2C	Q92754	450 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	NEUROG1	Q92886	237 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	BOD1	Q96IK1	185 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	CNBD2	Q96M20	576 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	CNN2	Q99439	309 aa	Known RBP	10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	KCNS3	Q9BQ31	491 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	USB1	Q9BQ65	265 aa	Known RBP	10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	WNT5B	Q9H1J7	359 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	ESRP2	Q9H6T0	727 aa	Known RBP	10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	CENPM	Q9NSP4	180 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	CLN6	Q9NWW5	311 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	KCNN3	Q9UGI6	736 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	POU2F3	Q9UKI9	436 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	TIMM10B	Q9Y5J6	103 aa		10.8	□□□□□ -0.68
GABPB1-208	ENST00000558970	PSMD9	O00233	223 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	MPZL2	O60487	215 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	WBP4	O75554	376 aa	Known RBP	10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	IGKV3-15	P01624	115 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	HRG	P04196	525 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	CD3E	P07766	207 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	ZNF14	P17017	642 aa	Predicted RBP	10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	CD40	P25942	277 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	STOM	P27105	288 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	CALCR	P30988	508 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	APLNR	P35414	380 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	BLVRA	P53004	296 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	GALK2	Q01415	458 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	TLE4	Q04727	773 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	CCDC92	Q53HC0	331 aa	Predicted RBP	10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	BEX5	Q5H9J7	111 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	NCMAP	Q5T1S8	102 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	KRT80	Q6KB66	452 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	VHLL	Q6RSH7	139 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	TMEM108	Q6UXF1	575 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	TIGD4	Q8IY51	512 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	PAQR4	Q8N4S7	273 aa	Predicted RBP	10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	RFLNB	Q8N5W9	214 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	ACBD4	Q8NC06	268 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	SLC30A7	Q8NEW0	376 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	GJC3	Q8NFK1	279 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	OR4F15	Q8NGB8	312 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	RHOXF1	Q8NHV9	184 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	THEM6	Q8WUY1	208 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	TRUB1	Q8WWH5	349 aa	Known RBP	10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	RFK	Q969G6	155 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	RNFT2	Q96EX2	444 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	MAP6	Q96JE9	813 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	ZNF75A	Q96N20	296 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	AMELY	Q99218	206 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	ADGRL4	Q9HBW9	690 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	CYB5R1	Q9UHQ9	305 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	KLHDC2	Q9Y2U9	406 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	CACNA1D	Q01668	2161 aa		10.79	□□□□□ -0.68
GABPB1-208	ENST00000558970	C5orf49	A4QMS7	147 aa		10.78	□□□□□ -0.68
GABPB1-208	ENST00000558970		H0YJX3	145 aa		10.78	□□□□□ -0.68
GABPB1-208	ENST00000558970	TMCC2	O75069	709 aa		10.78	□□□□□ -0.68
GABPB1-208	ENST00000558970	IGLV1-44	P01699	117 aa		10.78	□□□□□ -0.68
GABPB1-208	ENST00000558970	CRYAA	P02489	173 aa		10.78	□□□□□ -0.68
GABPB1-208	ENST00000558970	SERPINA5	P05154	406 aa		10.78	□□□□□ -0.68
GABPB1-208	ENST00000558970	DBH	P09172	617 aa		10.78	□□□□□ -0.68
GABPB1-208	ENST00000558970	FAM157B	P0CG42	384 aa		10.78	□□□□□ -0.68
GABPB1-208	ENST00000558970	DBT	P11182	482 aa	Known RBP	10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms