RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 CIB4A0PJX0 185 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 METTL15A6NJ78 407 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 ZNF254O75437 659 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 HSMCR30P0CW71 290 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 ALDH3B2P48448 385 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 FOXG1P55316 489 aaPredicted RBP14.79□□□□□ -0.04
SNX1-203ENST00000558040 TAS2R43P59537 309 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 ROM1Q03395 351 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 TLE1Q04724 770 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 TIGD6Q17RP2 521 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 TP53I3Q53FA7 332 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 SYT6Q5T7P8 510 aaPredicted RBP14.79□□□□□ -0.04
SNX1-203ENST00000558040 OR7E24Q6IFN5 339 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 DEGS2Q6QHC5 323 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 RHOUQ7L0Q8 258 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 CCDC36Q8IYA8 594 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 ZNF679Q8IYX0 411 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 ZNF433Q8N7K0 673 aaPredicted RBP14.79□□□□□ -0.04
SNX1-203ENST00000558040 YIPF7Q8N8F6 280 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 RNF133Q8WVZ7 376 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 GATAD2BQ8WXI9 593 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 SLAMF6Q96DU3 332 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 COG8Q96MW5 612 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 OR5M11Q96RB7 305 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 ISYNA1Q9NPH2 558 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 TRIM36Q9NQ86 728 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 TIMM10BQ9Y5J6 103 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 BOD1L1Q8NFC6 3051 aa14.79□□□□□ -0.04
SNX1-203ENST00000558040 A0A096LPE4 126 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 A0A1W2PPZ6 126 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 B8ZZF3 427 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 EEF1E1-BLOC1S5C9J1V9 151 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 ZNF878C9JN71 531 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 EEF1E1O43324 174 aaKnown RBP14.78□□□□□ -0.04
SNX1-203ENST00000558040 INMTO95050 263 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 H2BFMP0C1H6 154 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 HOXC12P31275 282 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 TTKP33981 857 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 CD79BP40259 229 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 GBX2P52951 348 aaPredicted RBP14.78□□□□□ -0.04
SNX1-203ENST00000558040 OR12D2P58182 307 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 BDH1Q02338 343 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 ACSM1Q08AH1 577 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 MLLT11Q13015 90 aaPredicted RBP14.78□□□□□ -0.04
SNX1-203ENST00000558040 ZNF684Q5T5D7 378 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 MTFR2Q6P444 385 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 CFAP77Q6ZQR2 320 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 VASH1Q7L8A9 365 aaPredicted RBP14.78□□□□□ -0.04
SNX1-203ENST00000558040 GPR141Q7Z602 305 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.78□□□□□ -0.04
SNX1-203ENST00000558040 SKA3Q8IX90 412 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 ZNF485Q8NCK3 441 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 BCL2L2Q92843 193 aaPredicted RBP14.78□□□□□ -0.04
SNX1-203ENST00000558040 FBXO17Q96EF6 278 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 MAP6Q96JE9 813 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 AMELYQ99218 206 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 MGLLQ99685 303 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 ISG20L2Q9H9L3 353 aaKnown RBP14.78□□□□□ -0.04
SNX1-203ENST00000558040 CENPMQ9NSP4 180 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 BABAM2Q9NXR7 383 aa14.78□□□□□ -0.04
SNX1-203ENST00000558040 ATRXP46100 2492 aa14.77□□□□□ -0.04
SNX1-203ENST00000558040 PSMD9O00233 223 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 RER1O15258 196 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 RAD51DO75771 328 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 LYZL6O75951 148 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 UBL3O95164 117 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 HOXB1P14653 301 aaPredicted RBP14.77□□□□□ -0.05
SNX1-203ENST00000558040 ARR3P36575 388 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 RIDAP52758 137 aaKnown RBP14.77□□□□□ -0.05
SNX1-203ENST00000558040 UBE2NP61088 152 aaKnown RBP14.77□□□□□ -0.05
SNX1-203ENST00000558040 HIST1H3AP68431 136 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 RAB39AQ14964 217 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 RAB35Q15286 201 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 TAF13Q15543 124 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 TBRG1Q3YBR2 411 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 ARMCX4Q5H9R4 360 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 HIST2H3PS2Q5TEC6 136 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 TMEM53Q6P2H8 277 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 LRRN1Q6UXK5 716 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 NCCRP1Q6ZVX7 275 aaPredicted RBP14.77□□□□□ -0.05
SNX1-203ENST00000558040 HIST2H3AQ71DI3 136 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 LUZP2Q86TE4 346 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 CXorf67Q86X51 503 aaPredicted RBP14.77□□□□□ -0.05
SNX1-203ENST00000558040 KLBQ86Z14 1044 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 C17orf78Q8N4C9 275 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 BOD1Q96IK1 185 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 HDHD2Q9H0R4 259 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 NIPAL2Q9H841 368 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 RNF121Q9H920 327 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 ELOVL3Q9HB03 270 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 SLCO1C1Q9NYB5 712 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 PLEK2Q9NYT0 353 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 COQ3Q9NZJ6 369 aa14.77□□□□□ -0.05
SNX1-203ENST00000558040 MRM2Q9UI43 246 aaKnown RBP14.77□□□□□ -0.05
SNX1-203ENST00000558040 A8MXE2 369 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 PRR32B1ATL7 298 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 SGCEO43556 437 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 ZNF32P17041 273 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 HSD11B1P28845 292 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 OPRL1P41146 370 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms