RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 GABRB1P18505 474 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 PTAFRP25105 342 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 CD40P25942 277 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 HTR1FP30939 366 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 NR1H2P55055 460 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 BSPH1Q075Z2 132 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 MAD2L1BPQ15013 274 aaPredicted RBP18.49■□□□□ 0.55
CASC4-204ENST00000557945 SLC25A30Q5SVS4 291 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 SLC18B1Q6NT16 456 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 ZNF774Q6NX45 483 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 TMEM154Q6P9G4 183 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 MYPOPQ86VE0 399 aaPredicted RBP18.49■□□□□ 0.55
CASC4-204ENST00000557945 TIGD4Q8IY51 512 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 ALDH16A1Q8IZ83 802 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 C8orf59Q8N0T1 100 aaPredicted RBP18.49■□□□□ 0.55
CASC4-204ENST00000557945 GJC3Q8NFK1 279 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 Q96MT0 163 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 ZNF75AQ96N20 296 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 MARCH7Q9H992 704 aa18.49■□□□□ 0.55
CASC4-204ENST00000557945 WARS2Q9UGM6 360 aaKnown RBP18.49■□□□□ 0.55
CASC4-204ENST00000557945 GDF2Q9UK05 429 aaPredicted RBP18.49■□□□□ 0.55
CASC4-204ENST00000557945 SNTNA6NMZ2 147 aa18.48■□□□□ 0.55
CASC4-204ENST00000557945 SGCEO43556 437 aa18.48■□□□□ 0.55
CASC4-204ENST00000557945 DOK2O60496 412 aa18.48■□□□□ 0.55
CASC4-204ENST00000557945 SERPINA5P05154 406 aa18.48■□□□□ 0.55
CASC4-204ENST00000557945 CD3EP07766 207 aa18.48■□□□□ 0.55
CASC4-204ENST00000557945 PSKH1P11801 424 aa18.48■□□□□ 0.55
CASC4-204ENST00000557945 ZNF14P17017 642 aaPredicted RBP18.48■□□□□ 0.55
CASC4-204ENST00000557945 C3orf36Q3SXR2 165 aa18.48■□□□□ 0.55
CASC4-204ENST00000557945 NCMAPQ5T1S8 102 aa18.48■□□□□ 0.55
CASC4-204ENST00000557945 DPY19L4Q7Z388 723 aa18.48■□□□□ 0.55
CASC4-204ENST00000557945 KCNS3Q9BQ31 491 aa18.48■□□□□ 0.55
CASC4-204ENST00000557945 RASSF4Q9H2L5 321 aa18.48■□□□□ 0.55
CASC4-204ENST00000557945 PLEK2Q9NYT0 353 aa18.48■□□□□ 0.55
CASC4-204ENST00000557945 PTHP01270 115 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 APEX1P27695 318 aaKnown RBP18.47■□□□□ 0.55
CASC4-204ENST00000557945 ATP6V1E1P36543 226 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 TEX30Q5JUR7 227 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 ZNF787Q6DD87 383 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 CFAP77Q6ZQR2 320 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 SHFQ7M4L6 423 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 DCXRQ7Z4W1 244 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 ZNF584Q8IVC4 421 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
CASC4-204ENST00000557945 CPEB3Q8NE35 698 aaKnown RBP18.47■□□□□ 0.55
CASC4-204ENST00000557945 SLC30A7Q8NEW0 376 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 OR51G2Q8NGK0 314 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 CNIH3Q8TBE1 160 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 SMAP2Q8WU79 429 aaPredicted RBP18.47■□□□□ 0.55
CASC4-204ENST00000557945 MARVELD3Q96A59 401 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 CNN2Q99439 309 aaKnown RBP18.47■□□□□ 0.55
CASC4-204ENST00000557945 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.47■□□□□ 0.55
CASC4-204ENST00000557945 HSPE1-MOB4S4R3N1 261 aa18.47■□□□□ 0.55
CASC4-204ENST00000557945 ABCD4O14678 606 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 APLNRP35414 380 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 HTR5AP47898 357 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 NUDT6P53370 316 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 NAAAQ02083 359 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 EIF2B1Q14232 305 aaKnown RBP18.46■□□□□ 0.55
CASC4-204ENST00000557945 GGTLC2Q14390 218 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 PCK2Q16822 640 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 CCDC92Q53HC0 331 aaPredicted RBP18.46■□□□□ 0.55
CASC4-204ENST00000557945 VASH1Q7L8A9 365 aaPredicted RBP18.46■□□□□ 0.55
CASC4-204ENST00000557945 SLC16A9Q7RTY1 509 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 APH1BQ8WW43 257 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 RADILQ96JH8 1075 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 HS3ST6Q96QI5 342 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 C1orf198Q9H425 327 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 HAO2Q9NYQ3 351 aa18.46■□□□□ 0.55
CASC4-204ENST00000557945 APOL3O95236 402 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 GOSR1O95249 250 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 CRYAAP02489 173 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 CCL2P13500 99 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 CCNOP22674 350 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 STOMP27105 288 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 MTNR1AP48039 350 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 GDI2P50395 445 aaKnown RBP18.45■□□□□ 0.54
CASC4-204ENST00000557945 ISL1P61371 349 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 HIST1H3AP68431 136 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 SPOCK1Q08629 439 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 TMED1Q13445 227 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 RAB35Q15286 201 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 TBC1D28Q2M2D7 210 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 ELFN2Q5R3F8 820 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 HIST2H3PS2Q5TEC6 136 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 ADAM5Q6NVV9 412 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 SLC22A25Q6T423 547 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 USP51Q70EK9 711 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 HIST2H3AQ71DI3 136 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 ZNF295-AS1Q8N0V1 137 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 IL17RDQ8NFM7 739 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 RNFT2Q96EX2 444 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 MAP6Q96JE9 813 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 YIPF3Q9GZM5 350 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 ADGRL4Q9HBW9 690 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 RNF115Q9Y4L5 304 aa18.45■□□□□ 0.54
CASC4-204ENST00000557945 WBP4O75554 376 aaKnown RBP18.44■□□□□ 0.54
CASC4-204ENST00000557945 LOXP28300 417 aaPredicted RBP18.44■□□□□ 0.54
CASC4-204ENST00000557945 HCCSP53701 268 aa18.44■□□□□ 0.54
CASC4-204ENST00000557945 TLE4Q04727 773 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms