RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 FAM9CQ8IZT9 166 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 HDDC3Q8N4P3 179 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 CLDN19Q8N6F1 224 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 OR56A4Q8NGH8 313 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 OR2T34Q8NGX1 318 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 OR5K2Q8NHB8 316 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 LKAAEAR1Q8TD35 194 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 MCOLN3Q8TDD5 553 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 SRSF12Q8WXF0 261 aaKnown RBP2.49□□□□□ -2.01
VRK1-207ENST00000557352 TMEM37Q8WXS4 190 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 FAM3CQ92520 227 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 TMEM159Q96B96 161 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 CMTM5Q96DZ9 223 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 C19orf60Q96EN9 201 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 FOPNLQ96NB1 174 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 SMIM14Q96QK8 99 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 SCRT1Q9BWW7 348 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 SLC17A9Q9BYT1 436 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 SLC25A39Q9BZJ4 359 aaPredicted RBP2.49□□□□□ -2.01
VRK1-207ENST00000557352 PCBD2Q9H0N5 130 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 OR52A5Q9H2C5 316 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 ESM1Q9NQ30 184 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 CENPMQ9NSP4 180 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 FBXL12Q9NXK8 326 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 SPATA7Q9P0W8 599 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 ATXN10Q9UBB4 475 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 KCNN3Q9UGI6 736 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 PDE10AQ9Y233 779 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 TMED5Q9Y3A6 229 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 DNAJC15Q9Y5T4 150 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 HEBP2Q9Y5Z4 205 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 VPS13AQ96RL7 3174 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 FAM186AA6NE01 2351 aa2.49□□□□□ -2.01
VRK1-207ENST00000557352 MUC3AQ02505 3323 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 CUL9Q8IWT3 2517 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 CNTRLQ7Z7A1 2325 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 KCNE1BA0A087WTH5 132 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 A0A0J9YVX5 310 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 A0A0U1RQS6 177 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 SLC9B1P1A6NJY1 282 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 OR5K4A6NMS3 321 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 IQCF5A8MTL0 148 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 BBIP1A8MTZ0 92 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 SUPT3HB4E1H0 165 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 PRAMEF26H0Y7S4 382 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 H0YIV9 168 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 FOXE1O00358 373 aaPredicted RBP2.48□□□□□ -2.01
VRK1-207ENST00000557352 UBFD1O14562 309 aaKnown RBP2.48□□□□□ -2.01
VRK1-207ENST00000557352 OR7A17O14581 309 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 TAPBPO15533 448 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 SUPT3HO75486 399 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 LYPLA1O75608 230 aaPredicted RBP2.48□□□□□ -2.01
VRK1-207ENST00000557352 TRIM16O95361 564 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 CLDN9O95484 217 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 C1orf105O95561 183 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 THRAP10827 490 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 IDO1P14902 403 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 GNSP15586 552 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 GABRG2P18507 467 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 IMPA1P29218 277 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 SAA4P35542 130 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 RABIFP47224 123 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 CCNG1P51959 295 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 RAP1GDS1P52306 607 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 SRP54P61011 504 aaKnown RBP2.48□□□□□ -2.01
VRK1-207ENST00000557352 NCALDP61601 193 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 ERVK-8P63133 956 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 RELAQ04206 551 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 RIPK1Q13546 671 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 RCAN2Q14206 197 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 HERPUD1Q15011 391 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 MAPRE2Q15555 327 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 CLPPQ16740 277 aaPredicted RBP2.48□□□□□ -2.01
VRK1-207ENST00000557352 DNAL1Q4LDG9 190 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 PYCR3Q53H96 274 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 TMEM220Q6QAJ8 160 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 HACD2Q6Y1H2 254 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 RFLNAQ6ZTI6 216 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 GOLGA7Q7Z5G4 137 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 RABEPKQ7Z6M1 372 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 TAF8Q7Z7C8 310 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 RANBP3LQ86VV4 465 aaPredicted RBP2.48□□□□□ -2.01
VRK1-207ENST00000557352 AMZ2Q86W34 360 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 TRAPPC5Q8IUR0 188 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 TBC1D21Q8IYX1 336 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 LRRC17Q8N6Y2 441 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 TMEM185AQ8NFB2 350 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 OR9A1PQ8NGU1 263 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 TWIST2Q8WVJ9 160 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 ELMO1Q92556 727 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 POP5Q969H6 163 aaKnown RBP2.48□□□□□ -2.01
VRK1-207ENST00000557352 UBE2E3Q969T4 207 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 RAD51AP1Q96B01 352 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 C11orf24Q96F05 449 aaPredicted RBP2.48□□□□□ -2.01
VRK1-207ENST00000557352 FCRL1Q96LA6 429 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 PPP3R2Q96LZ3 170 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 COQ7Q99807 217 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 DPH7Q9BTV6 452 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 WRAP53Q9BUR4 548 aaKnown RBP2.48□□□□□ -2.01
VRK1-207ENST00000557352 APOOQ9BUR5 198 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms