RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 TRAF3IP2O43734 574 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SELENOFO60613 162 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 AQP8O94778 261 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ZNF19P17023 458 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ZNF24P17028 368 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ENTPD1P49961 510 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 BIDP55957 195 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 CLRN1P58418 232 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SIRPAP78324 504 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 RUNX1T1Q06455 604 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 MELKQ14680 651 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 BCL2A1Q16548 175 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 DMKNQ6E0U4 476 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SPINK14Q6IE38 97 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SLC18B1Q6NT16 456 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 NHLRC1Q6VVB1 395 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 B3GLCTQ6Y288 498 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SLC22A16Q86VW1 577 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 CIARTQ8N365 385 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 OR51L1Q8NGJ5 315 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 OR6N2Q8NGY6 317 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 OR2V1Q8NHB1 315 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 OTOSQ8NHW6 89 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 RPS4Y2Q8TD47 263 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 AP3S1Q92572 193 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 TIMP4Q99727 224 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 MRPL13Q9BYD1 178 aaKnown RBP12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SLIRPQ9GZT3 109 aaKnown RBP12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 NXF2Q9GZY0 626 aaKnown RBP12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 TMEM185BQ9H7F4 350 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 DEPPQ9NTK1 212 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 RCE1Q9Y256 329 aa12.6□□□□□ -0.39
TRAPPC6B-206ENST00000556765 G3V3Y1 287 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 H7C1C5 153 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 H7C1Q1 480 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 TMEM127O75204 238 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 TRAPPC6AO75865 159 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 GATBO75879 557 aaKnown RBP12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ZNF432O94892 652 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 HLA-DQA2P01906 255 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ZNF823P16415 610 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ALOX5APP20292 161 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ENPP1P22413 925 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 S100A5P33763 92 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 RORCP51449 518 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 GFRA1P56159 465 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 OR12D2P58182 307 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 RPS3AP61247 264 aaKnown RBP12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 LCN6P62502 163 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 NKX6-1P78426 367 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 PLGLB1Q02325 96 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 DCTN2Q13561 401 aaKnown RBP12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 CDK5R1Q15078 307 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 PCK2Q16822 640 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 RNFT1Q5M7Z0 435 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ZNF684Q5T5D7 378 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SHEQ5VZ18 495 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 DEGS2Q6QHC5 323 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 GALNTL5Q7Z4T8 443 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SULF2Q8IWU5 870 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 RPRMLQ8N4K4 120 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ZFP62Q8NB50 900 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 OR5M1Q8NGP8 315 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 MCFD2Q8NI22 146 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 BORCS5Q969J3 196 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 PELI1Q96FA3 418 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 TSSK2Q96PF2 358 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 TP63Q9H3D4 680 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ISG20L2Q9H9L3 353 aaKnown RBP12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 PLGRKTQ9HBL7 147 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ACKR4Q9NPB9 350 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 GNG8Q9UK08 70 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 PEX16Q9Y5Y5 336 aa12.59□□□□□ -0.39
TRAPPC6B-206ENST00000556765 A0A0G2JMM0 328 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 A0A0J9YW62 118 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 PNMA8CA0A1B0GUJ8 204 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 A0A1W2PPB8 328 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 A0A1W2PRS3 328 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 A6NNC1 897 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 KIR3DP1A8MWS1 328 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 DCTN6O00399 190 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 GABRPO00591 440 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 WIPF1O43516 503 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 ZNF254O75437 659 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 GLSO94925 669 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 ACTL6AO96019 429 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 LALBAP00709 142 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 PGA4P0DJD7 388 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 PGA3P0DJD8 388 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 HLA-DOBP13765 273 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 CTLA4P16410 223 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 SHC1P29353 583 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 KIR2DL3P43628 341 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 ZNF133P52736 654 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 CARD18P57730 90 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 RPS25P62851 125 aaKnown RBP12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 ROM1Q03395 351 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 PMPCAQ10713 525 aa12.58□□□□□ -0.4
TRAPPC6B-206ENST00000556765 SNTB1Q13884 538 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms