RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 TRBV2A0A0J9YWF9 115 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 LOC100506127A0A0U1RQW1 187 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 MBD3L4A6NDZ8 208 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 MBD3L3A6NE82 208 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 MBD3L5A6NJ08 208 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 HSPB2A8KAH6 182 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 RPL36A-HNRNPH2H7BZ11 118 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 ERVH48-1M5A8F1 160 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 OGG1O15527 345 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 ZNF254O75437 659 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 GABARAPO95166 117 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 FARS2O95363 451 aaKnown RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 WNT11O96014 354 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 IL2RAP01589 272 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 CST2P09228 141 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 TMIGD3P0DMS9 266 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 EDN3P14138 238 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 B4GALT1P15291 398 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 PSMA1P25786 263 aaKnown RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 RPS25P62851 125 aaKnown RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 ROM1Q03395 351 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 GTF3C1Q12789 2109 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 FOXF2Q12947 444 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 MRPL28Q13084 256 aaKnown RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 AQP6Q13520 282 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 ENDOGQ14249 297 aaKnown RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 STK11Q15831 433 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 HSPB2Q16082 182 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 CNPY1Q3B7I2 92 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 TIMM50Q3ZCQ8 353 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 FAM27BQ5VT28 67 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 LIPNQ5VXI9 398 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 FBXW9Q5XUX1 488 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 OR7E24Q6IFN5 339 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 ZNF544Q6NX49 715 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 RPL22L1Q6P5R6 122 aaKnown RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 VWA1Q6PCB0 445 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 KLHL24Q6TFL4 600 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 C3P1Q6ZMU1 363 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 CFAP77Q6ZQR2 320 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 SLC16A12Q6ZSM3 486 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 SLC16A14Q7RTX9 510 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 EGFL6Q8IUX8 553 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 SLC22A24Q8N4F4 322 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 GJC3Q8NFK1 279 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 OR6K3Q8NGY3 331 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 MBD3L2Q8NHZ7 208 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 HAVCR2Q8TDQ0 301 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 ST7LQ8TDW4 575 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 RPL3LQ92901 407 aaKnown RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 TMEM203Q969S6 136 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 MAP6Q96JE9 813 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 TMED9Q9BVK6 235 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 RNF121Q9H920 327 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 NDUFB11Q9NX14 153 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 ST6GALNAC2Q9UJ37 374 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 SH3BGRL2Q9UJC5 107 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 STUB1Q9UNE7 303 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 SSR3Q9UNL2 185 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 GTF2A1LQ9UNN4 478 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 PROCRQ9UNN8 238 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 LRP12Q9Y561 859 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 FAM215AQ9Y5M1 114 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 SIRT4Q9Y6E7 314 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 MGAQ8IWI9 3026 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 CACNA1AO00555 2505 aa8.49□□□□□ -1.05
HNRNPC-220ENST00000555585 ZNF878C9JN71 531 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 H3BMQ9 156 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 ZNF701M0R085 212 aaPredicted RBP8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 RER1O15258 196 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 LRRTM2O43300 516 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 SLC19A2O60779 497 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 ABHD16AO95870 558 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 CRHP06850 196 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 HSD11B1P28845 292 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 MPGP29372 298 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 GABRA5P31644 462 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 KIR2DL2P43627 348 aaPredicted RBP8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 TGM4P49221 684 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 GDI2P50395 445 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 FOXG1P55316 489 aaPredicted RBP8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 VBP1P61758 197 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 GPR50Q13585 617 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 ALKBH1Q13686 389 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 CDK5R1Q15078 307 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 GUSBP1Q15486 140 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 EIF2S3LQ2VIR3 472 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 CCDC58Q4VC31 144 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 DEGS2Q6QHC5 323 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 TFAP2EQ6VUC0 442 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 SEM1Q6ZVN7 128 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 DOLPP1Q86YN1 238 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 SKA3Q8IX90 412 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 RPRMLQ8N4K4 120 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 RNF133Q8WVZ7 376 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 FBXO17Q96EF6 278 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 DOK1Q99704 481 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 BCL7BQ9BQE9 202 aa8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 SF3B6Q9Y3B4 125 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-220ENST00000555585 NCOR2Q9Y618 2525 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms