RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 STAMBPO95630 424 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 LYNX1P0DP58 116 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 RAP2AP10114 183 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 USF1P22415 310 aaPredicted RBP17.55■□□□□ 0.4
VTI1B-205ENST00000555543 SCRN3Q0VDG4 424 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 AQP6Q13520 282 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 GGTLC2Q14390 218 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 MEP1BQ16820 701 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 NKPD1Q17RQ9 610 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 DNAL1Q4LDG9 190 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 VASH1Q7L8A9 365 aaPredicted RBP17.55■□□□□ 0.4
VTI1B-205ENST00000555543 OR6V1Q8N148 313 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 LINC00471Q8N535 108 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 SDR9C7Q8NEX9 313 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 GTF3AQ92664 365 aaKnown RBP17.55■□□□□ 0.4
VTI1B-205ENST00000555543 SNX18Q96RF0 628 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 WACQ9BTA9 647 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 BPESC1Q9GZL8 116 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 MS4A5Q9H3V2 200 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 REEP1Q9H902 201 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 YLPM1P49750 1951 aaKnown RBP17.54■□□□□ 0.4
VTI1B-205ENST00000555543 IGHV4-61A0A0C4DH41 118 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 OR6C68A6NDL8 312 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 BHLHE40O14503 412 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 SGCEO43556 437 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 NCR1O76036 304 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 NGFP01138 241 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 HPXP02790 462 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 TP53P04637 393 aaPredicted RBP17.54■□□□□ 0.4
VTI1B-205ENST00000555543 NOS3P29474 1203 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 CRABP1P29762 137 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 MPV17P39210 176 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 HTR5AP47898 357 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 LSM6P62312 80 aaKnown RBP17.54■□□□□ 0.4
VTI1B-205ENST00000555543 GLO1Q04760 184 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 KCNMB1Q16558 191 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 MICAQ29983 383 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 ELFN2Q5R3F8 820 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 SLC35F1Q5T1Q4 408 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 RASSF6Q6ZTQ3 369 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.54■□□□□ 0.4
VTI1B-205ENST00000555543 ZNF786Q8N393 782 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 ABHD4Q8TB40 342 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 UBASH3BQ8TF42 649 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 CANT1Q8WVQ1 401 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 SLC7A6Q92536 515 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 POP5Q969H6 163 aaKnown RBP17.54■□□□□ 0.4
VTI1B-205ENST00000555543 MARS2Q96GW9 593 aaKnown RBP17.54■□□□□ 0.4
VTI1B-205ENST00000555543 CHID1Q9BWS9 393 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 SRA1Q9HD15 236 aaKnown RBP17.54■□□□□ 0.4
VTI1B-205ENST00000555543 RPRD1BQ9NQG5 326 aaKnown RBP17.54■□□□□ 0.4
VTI1B-205ENST00000555543 IL20Q9NYY1 176 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 EIF3KQ9UBQ5 218 aaKnown RBP17.54■□□□□ 0.4
VTI1B-205ENST00000555543 B9D1Q9UPM9 204 aa17.54■□□□□ 0.4
VTI1B-205ENST00000555543 JMJD1CQ15652 2540 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 DHRS12A0PJE2 317 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 AQP12BA6NM10 295 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 IDH3BO43837 385 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 RENP00797 406 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 COX5BP10606 129 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 GIFP27352 417 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 CENPAP49450 140 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.53■□□□□ 0.4
VTI1B-205ENST00000555543 CCDC92Q53HC0 331 aaPredicted RBP17.53■□□□□ 0.4
VTI1B-205ENST00000555543 DNM1P34Q6PK57 102 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 AQP12AQ8IXF9 295 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 NPEPL1Q8NDH3 523 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 OR52L1Q8NGH7 329 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 OR52E2Q8NGJ4 325 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 SLC25A40Q8TBP6 338 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 IPCEF1Q8WWN9 437 aaPredicted RBP17.53■□□□□ 0.4
VTI1B-205ENST00000555543 C4orf45Q96LM5 186 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 OR2J1Q9GZK6 312 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 RACGAP1Q9H0H5 632 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 PLEK2Q9NYT0 353 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 NDRG4Q9ULP0 352 aaKnown RBP17.53■□□□□ 0.4
VTI1B-205ENST00000555543 LHFPL6Q9Y693 200 aa17.53■□□□□ 0.4
VTI1B-205ENST00000555543 RER1O15258 196 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 SOX14O95416 240 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 IGHV3-13P01766 116 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 MAGEB1P43366 347 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 SELENOVP59797 346 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 PPP1CBP62140 327 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 PPP2R2BQ00005 443 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 RIN1Q13671 783 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 RPL13AP3Q6NVV1 102 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 ZBTB46Q86UZ6 589 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 SLC26A10Q8NG04 563 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 DGCR6LQ9BY27 220 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 POFUT1Q9H488 388 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 HINT3Q9NQE9 182 aaKnown RBP17.52■□□□□ 0.4
VTI1B-205ENST00000555543 POLR1DQ9Y2S0 133 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 ABCA2Q9BZC7 2435 aa17.52■□□□□ 0.4
VTI1B-205ENST00000555543 OR6C6A6NF89 314 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 C17orf100A8MU93 164 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 DNAJC8O75937 253 aaPredicted RBP17.51■□□□□ 0.39
VTI1B-205ENST00000555543 ABHD16AO95870 558 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 CST1P01037 141 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 TFP02787 698 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 IGHV4-31P0DP07 118 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms