RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SHPKQ9UHJ6 478 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 LSM7Q9UK45 103 aaKnown RBP0.77□□□□□ -2.29
SRP54-207ENST00000555535 ING4Q9UNL4 249 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 TSSC4Q9Y5U2 329 aaPredicted RBP0.77□□□□□ -2.29
SRP54-207ENST00000555535 KIAA1671Q9BY89 1806 aa0.77□□□□□ -2.29
SRP54-207ENST00000555535 HELZ2Q9BYK8 2649 aaKnown RBP0.76□□□□□ -2.29
SRP54-207ENST00000555535 NUP205Q92621 2012 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 OR6C74A6NCV1 312 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 SNTNA6NMZ2 147 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 NDUFC2-KCTD14E9PQ53 114 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 SOX15O60248 233 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 RP2O75695 350 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 H6PDO95479 791 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 HLA-DQA1P01909 254 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 FGF1P05230 155 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 SERPIND1P05546 499 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 KRT8P05787 483 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 ANXA5P08758 320 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 OR8U9P0C7N5 309 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 C1GALT1C1LP0DN25 315 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 OR5H8P0DN80 308 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 GGT1P19440 569 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 CHMLP26374 656 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 IFNA8P32881 189 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 SSTR5P35346 364 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 EPS15P42566 896 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 SSR1P43307 286 aaKnown RBP0.76□□□□□ -2.29
SRP54-207ENST00000555535 PRRX1P54821 245 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 TAS2R31P59538 309 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 RBX1P62877 108 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 KCNJ2P63252 427 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 MXD1Q05195 221 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 CYP24A1Q07973 514 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 PON2Q15165 354 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 KCTD21Q4G0X4 260 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 SOHLH1Q5JUK2 328 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 FBXW12Q6X9E4 464 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 CCDC73Q6ZRK6 1079 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 EFL1Q7Z2Z2 1120 aaKnown RBP0.76□□□□□ -2.29
SRP54-207ENST00000555535 TMEM256Q8N2U0 113 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 ST20-AS1Q8NBB2 130 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 TMEM104Q8NE00 496 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 FAM83FQ8NEG4 500 aaPredicted RBP0.76□□□□□ -2.29
SRP54-207ENST00000555535 LILRB4Q8NHJ6 448 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 RHEBL1Q8TAI7 183 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 PLPPR1Q8TBJ4 325 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 C15orf40Q8WUR7 153 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 EEF1AKMT3Q96AZ1 226 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 ECHDC3Q96DC8 303 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 PIK3IP1Q96FE7 263 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 COQ2Q96H96 371 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 PKNOX2Q96KN3 472 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 SH3GL1Q99961 368 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 SH3GL3Q99963 347 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 SHANK2-AS3Q9BTD1 123 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 PARD6BQ9BYG5 372 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 FGF23Q9GZV9 251 aaPredicted RBP0.76□□□□□ -2.29
SRP54-207ENST00000555535 NEUROG2Q9H2A3 272 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 CWH43Q9H720 699 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 TMEM9BQ9NQ34 198 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 DDX19AQ9NUU7 478 aaKnown RBP0.76□□□□□ -2.29
SRP54-207ENST00000555535 KLHL28Q9NXS3 571 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 ENOPH1Q9UHY7 261 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 BLOC1S6Q9UL45 172 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 MRPS7Q9Y2R9 242 aaKnown RBP0.76□□□□□ -2.29
SRP54-207ENST00000555535 TMED5Q9Y3A6 229 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 GOLT1BQ9Y3E0 138 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 ATP6V0A2Q9Y487 856 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 NPTNQ9Y639 398 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 DOCK6Q96HP0 2047 aa0.76□□□□□ -2.29
SRP54-207ENST00000555535 AHDC1Q5TGY3 1603 aaPredicted RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 ADAMTS13Q76LX8 1427 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 IGHV3OR16-8A0A075B7F1 116 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 SMIM26A0A096LP01 95 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 ZNF716A6NP11 495 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 GABRR3A8MPY1 467 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 NDC80O14777 642 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 LSM1O15116 133 aaKnown RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 ANGPT2O15123 496 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 NVLO15381 856 aaKnown RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 NUPL2O15504 423 aaKnown RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 GCM2O75603 506 aaPredicted RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 SURF6O75683 361 aaKnown RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 CNMDO75829 334 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 TMEM50AO95807 157 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 TSPAN12O95859 305 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 SERPINA3P01011 423 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 CD3GP09693 182 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 ACSM4P0C7M7 580 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 ZNF735P0CB33 412 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 RAB3BP20337 219 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 GLRA2P23416 452 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 DCKP27707 260 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 AQP2P41181 271 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 PRPHP41219 470 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 CXCL12P48061 93 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 GDI2P50395 445 aaKnown RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 RAB9AP51151 201 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 P2RX1P51575 399 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 VSX2P58304 361 aaPredicted RBP0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 214 ms