RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 DPPA2Q7Z7J5 298 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 GID4Q8IVV7 300 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 STX19Q8N4C7 294 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 OR13F1Q8NGS4 319 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 OR52N5Q8NH56 324 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 NSMAFQ92636 917 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 RFKQ969G6 155 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 ZMYND19Q96E35 227 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-218ENST00000555213 BOD1Q96IK1 185 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 OR5M11Q96RB7 305 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 CCDC90BQ9GZT6 254 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 SYT4Q9H2B2 425 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 MARCH7Q9H992 704 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 RPRD1BQ9NQG5 326 aaKnown RBP9.55□□□□□ -0.88
SHMT2-218ENST00000555213 SLC17A5Q9NRA2 495 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 TMEM38BQ9NVV0 291 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 COMMD3-BMI1R4GMX3 469 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 UNC79Q9P2D8 2635 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 ARPC4-TTLL3A0A0A6YYG9 625 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 A0A1W2PPL8 197 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 SLC22A31A6NKX4 558 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 SNTNA6NMZ2 147 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 KHDRBS3O75525 346 aaKnown RBP9.54□□□□□ -0.88
SHMT2-218ENST00000555213 GLCEO94923 617 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 FADS2O95864 444 aaKnown RBP9.54□□□□□ -0.88
SHMT2-218ENST00000555213 GPANK1O95872 356 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 SCG5P05408 212 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 OR8G3PP0DMU2 310 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 PSKH1P11801 424 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 CTLA4P16410 223 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 PAICSP22234 425 aaKnown RBP9.54□□□□□ -0.88
SHMT2-218ENST00000555213 CRYGSP22914 178 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 SSTR2P30874 369 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 ZNF133P52736 654 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-218ENST00000555213 FOXG1P55316 489 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-218ENST00000555213 MRPS34P82930 218 aaKnown RBP9.54□□□□□ -0.88
SHMT2-218ENST00000555213 ZNF85Q03923 595 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 BEX5Q5H9J7 111 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 SLC35D3Q5M8T2 416 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 ZNF627Q7L945 461 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 LHFPL3Q86UP9 236 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 ZNF511Q8NB15 262 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 PROKR2Q8NFJ6 384 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 BCL2L2Q92843 193 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-218ENST00000555213 OTULINQ96BN8 352 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 YIPF6Q96EC8 236 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 KCNN2Q9H2S1 579 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 RERGLQ9H628 205 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 ESRP2Q9H6T0 727 aaKnown RBP9.54□□□□□ -0.88
SHMT2-218ENST00000555213 FBXL3Q9UKT7 428 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 SNX5Q9Y5X3 404 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 HCFC1P51610 2035 aa9.54□□□□□ -0.88
SHMT2-218ENST00000555213 A6NNC1 897 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 SLC16A7O60669 478 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 UBL3O95164 117 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 RAB36O95755 333 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 THBDP07204 575 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 CD79AP11912 226 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 LIPAP38571 399 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 GLO1Q04760 184 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 DAZAP2Q15038 168 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-218ENST00000555213 TBCEQ15813 527 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-218ENST00000555213 SLC36A2Q495M3 483 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 ZNF684Q5T5D7 378 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 SLC25A47Q6Q0C1 308 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 TMEM108Q6UXF1 575 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 SSX6Q7RTT6 188 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 TMEM200AQ86VY9 491 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 GLB1L2Q8IW92 636 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 TIGD4Q8IY51 512 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 SLC22A24Q8N4F4 322 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 OR51G2Q8NGK0 314 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 OR2T4Q8NH00 348 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 RNF166Q96A37 237 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-218ENST00000555213 ZNF837Q96EG3 531 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-218ENST00000555213 C14orf79Q96F83 325 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 COG8Q96MW5 612 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 NAA50Q9GZZ1 169 aaKnown RBP9.53□□□□□ -0.88
SHMT2-218ENST00000555213 SEC61A2Q9H9S3 476 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 SIAEQ9HAT2 523 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 MRPL22Q9NWU5 206 aaKnown RBP9.53□□□□□ -0.88
SHMT2-218ENST00000555213 ERVK13-1Q9NX77 482 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 MOKQ9UQ07 419 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 SLC25A15Q9Y619 301 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 FKBP7Q9Y680 259 aa9.53□□□□□ -0.88
SHMT2-218ENST00000555213 A0A1W2PR80 420 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 TMEM129A0AVI4 362 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 IRGMA1A4Y4 181 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 PRR32B1ATL7 298 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 SELENOFO60613 162 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 MPZL1O95297 269 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 LALBAP00709 142 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 MRPL3P09001 348 aaKnown RBP9.52□□□□□ -0.89
SHMT2-218ENST00000555213 MSR1P21757 451 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 ARR3P36575 388 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 TGFBR2P37173 567 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 CENPAP49450 140 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 ZNF83P51522 516 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 PCBD1P61457 104 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 TLE4Q04727 773 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms