RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 IL17RDQ8NFM7 739 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 OTOSQ8NHW6 89 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 FGFBP3Q8TAT2 258 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 CNIH3Q8TBE1 160 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 ZNF75AQ96N20 296 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 ADGRL4Q9HBW9 690 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 PLCXD1Q9NUJ7 323 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 CRIM1Q9NZV1 1036 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 IQCMA0A1B0GVH7 501 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 A0A1W2PR80 420 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 IRGMA1A4Y4 181 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 SGCEO43556 437 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 SELENOFO60613 162 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 SPARCP09486 303 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 ZNF14P17017 642 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 PTAFRP25105 342 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 ATP6V1E1P36543 226 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 TUBA1BP68363 451 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 TUBA4AP68366 448 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 PSG4Q00888 419 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 ZNF91Q05481 1191 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 PIGFQ07326 219 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 RAB40BQ12829 278 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 KLHL22Q53GT1 634 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 PABPC1L2AQ5JQF8 200 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 KRT80Q6KB66 452 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 TMEM108Q6UXF1 575 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 B3GLCTQ6Y288 498 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 TUBA1AQ71U36 451 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 WFDC8Q8IUA0 241 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 RNFT2Q96EX2 444 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 HDHD2Q9H0R4 259 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 AASSQ9UDR5 926 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 GDF2Q9UK05 429 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 A1L4Q6 167 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 PHYHO14832 338 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 OR2T7P0C7T2 308 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 PATE4P0C8F1 98 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 NAA10P41227 235 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 NUDT6P53370 316 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 NR1H2P55055 460 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 ECH1Q13011 328 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 DAZAP2Q15038 168 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 RAB35Q15286 201 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 BEX5Q5H9J7 111 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 SP5Q6BEB4 398 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 CDC20BQ86Y33 519 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 OR51G2Q8NGK0 314 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 OR2T27Q8NH04 317 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 IPCEF1Q8WWN9 437 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 ASB17Q8WXJ9 295 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 ZC3HAV1LQ96H79 300 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 WNT5BQ9H1J7 359 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 ESRP2Q9H6T0 727 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 NOX3Q9HBY0 568 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 PLEK2Q9NYT0 353 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 NPAP1Q9NZP6 1156 aa14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 EXOGQ9Y2C4 368 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-203ENST00000554901 RER1O15258 196 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 FADS2O95864 444 aaKnown RBP14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 ALOX5APP20292 161 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 SLC15A1P46059 708 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 IDH3GP51553 393 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 ACTC1P68032 377 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 ACTA1P68133 377 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 SNTB1Q13884 538 aaKnown RBP14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 CCDC92Q53HC0 331 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 ELFN2Q5R3F8 820 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 C6orf141Q5SZD1 244 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 OTPQ5XKR4 325 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 VASH1Q7L8A9 365 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 DCXRQ7Z4W1 244 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 LINC00346Q8IVM7 164 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 SLC35F2Q8IXU6 374 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 OR1J2Q8NGS2 313 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 ST7LQ8TDW4 575 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 MAP6Q96JE9 813 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 CNBD2Q96M20 576 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 MYCBPQ99417 103 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 COQ7Q99807 217 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 ABHD6Q9BV23 337 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 DDX28Q9NUL7 540 aaKnown RBP14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 CNOT2Q9NZN8 540 aaKnown RBP14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 LAMP5Q9UJQ1 280 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 LRRC42Q9Y546 428 aa14.3□□□□□ -0.12
SPTLC2-203ENST00000554901 IGHV1-18A0A0C4DH31 117 aa14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 OR6C6A6NF89 314 aa14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 SYNGR3O43761 229 aa14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 DOK2O60496 412 aa14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 LYNP07948 512 aa14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 MRPL3P09001 348 aaKnown RBP14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 CCDC159P0C7I6 412 aa14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 PIPP12273 146 aaPredicted RBP14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 ZNF83P51522 516 aa14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 MED21Q13503 144 aa14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 EIF2B1Q14232 305 aaKnown RBP14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 RAB39AQ14964 217 aa14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 SMN1Q16637 294 aaKnown RBP14.29□□□□□ -0.12
SPTLC2-203ENST00000554901 LAIR2Q6ISS4 152 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms