RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 RPS15AP62244 130 aaKnown RBP2□□□□□ -2.09
SCFD1-213ENST00000554776 HIKESHIQ53FT3 197 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 PIP5KL1Q5T9C9 394 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 GPR107Q5VW38 600 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 TTC19Q6DKK2 380 aaPredicted RBP2□□□□□ -2.09
SCFD1-213ENST00000554776 HDDC2Q7Z4H3 204 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 TMEM150AQ86TG1 271 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 MICU2Q8IYU8 434 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 COMMD1Q8N668 190 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 Q8N976 141 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 OR4S2Q8NH73 311 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 OR5K2Q8NHB8 316 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 CD300LFQ8TDQ1 290 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 ZNF707Q96C28 371 aaPredicted RBP2□□□□□ -2.09
SCFD1-213ENST00000554776 BMFQ96LC9 184 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 ZNF317Q96PQ6 595 aaPredicted RBP2□□□□□ -2.09
SCFD1-213ENST00000554776 MICU1Q9BPX6 476 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 ANKRD60Q9BZ19 345 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 NCOR1P1Q9H4R4 102 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 C8orf33Q9H7E9 229 aaPredicted RBP2□□□□□ -2.09
SCFD1-213ENST00000554776 SLC40A1Q9NP59 571 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 ZDHHC4Q9NPG8 344 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 MYEF2Q9P2K5 600 aaKnown RBP2□□□□□ -2.09
SCFD1-213ENST00000554776 CLN8Q9UBY8 286 aa2□□□□□ -2.09
SCFD1-213ENST00000554776 DENND4AQ7Z401 1863 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 MN1Q10571 1320 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-213ENST00000554776 PIKFYVEQ9Y2I7 2098 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 IGLV11-55A0A075B6I3 123 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 A0A096LNJ9 63 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 A0A1B0GTQ1 180 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 GOLGA6L7A0A1B0GV03 622 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 NCBP2LA6PVI3 153 aaKnown RBP1.99□□□□□ -2.09
SCFD1-213ENST00000554776 LYRM9A8MSI8 78 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 ANKRD63C9JTQ0 380 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 INS-IGF2F8WCM5 200 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 H0YIV9 168 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 M0R3G1 203 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 SCAMP2O15127 329 aaKnown RBP1.99□□□□□ -2.09
SCFD1-213ENST00000554776 SIVA1O15304 175 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 SCELO95171 688 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 RAB3DO95716 219 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 LSM8O95777 96 aaKnown RBP1.99□□□□□ -2.09
SCFD1-213ENST00000554776 PRB2P02812 416 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-213ENST00000554776 IFNW1P05000 195 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 POLR2MP0CAP2 368 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 TLX1NBP0CAT3 122 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 RALBP11234 206 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 CTRB1P17538 263 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 TCP10Q12799 353 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 DOC2AQ14183 400 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 GABRA6Q16445 453 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 XKR4Q5GH76 650 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 AGBL2Q5U5Z8 902 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 METTL21CQ5VZV1 264 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 TTC23LQ6PF05 361 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 CEMP1Q6PRD7 247 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-213ENST00000554776 TIFABQ6ZNK6 161 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 H2AFVQ71UI9 128 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 ABHD13Q7L211 337 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 OTUD6AQ7L8S5 288 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 PEX26Q7Z412 305 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 MRPL55Q7Z7F7 128 aaKnown RBP1.99□□□□□ -2.09
SCFD1-213ENST00000554776 ZNF786Q8N393 782 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 ARRDC1Q8N5I2 433 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 OR10AD1Q8NGE0 317 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 OR2A1Q8NGT9 310 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 FAM104AQ969W3 186 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 DNAJC1Q96KC8 554 aaKnown RBP1.99□□□□□ -2.09
SCFD1-213ENST00000554776 ZNF285Q96NJ3 590 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 SLC25A2Q9BXI2 301 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 ZYG11BQ9C0D3 744 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 TMEM38AQ9H6F2 299 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 EDA2RQ9HAV5 297 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 WFDC1Q9HC57 220 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 UVRAGQ9P2Y5 699 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 RCL1Q9Y2P8 373 aaKnown RBP1.99□□□□□ -2.09
SCFD1-213ENST00000554776 RHBDD3Q9Y3P4 386 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 TET2Q6N021 2002 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-213ENST00000554776 LRP4O75096 1905 aa1.99□□□□□ -2.09
SCFD1-213ENST00000554776 NOTCH2Q04721 2471 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 MROH7-TTC4A0A0A0MT08 1334 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 MROH7Q68CQ1 1323 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 MAPK8IP3Q9UPT6 1336 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 KCNE1BA0A087WTH5 132 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 H0YC42 278 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 H7C1H1 209 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 BCKDKO14874 412 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 ANGPTL7O43827 346 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 ENTPD5O75356 428 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 KRT16P08779 473 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 ZNF823P16415 610 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 RAB3BP20337 219 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 SERPINB8P50452 374 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 CLDN8P56748 225 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 MECOMQ03112 1051 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 GINS1Q14691 196 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 HADHQ16836 314 aaKnown RBP1.98□□□□□ -2.09
SCFD1-213ENST00000554776 TRMT5Q32P41 509 aaKnown RBP1.98□□□□□ -2.09
SCFD1-213ENST00000554776 TSPO2Q5TGU0 170 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 PLCXD3Q63HM9 321 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms