RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 IGHV2-70DA0A0C4DH43 119 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 IQCMA0A1B0GVH7 501 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 F5H0A9 414 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-229ENST00000554672 MGRN1O60291 552 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 GPR137BO60478 399 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 PLIN3O60664 434 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 GLRA3O75311 464 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 MFN2O95140 757 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 FARS2O95363 451 aaKnown RBP4.01□□□□□ -1.77
ATXN3-229ENST00000554672 TGDSO95455 350 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 MELTFP08582 738 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 NR2F1P10589 423 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 G6PDP11413 515 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 RPS4Y1P22090 263 aaKnown RBP4.01□□□□□ -1.77
ATXN3-229ENST00000554672 GCAP28676 217 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 CHI3L1P36222 383 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-229ENST00000554672 MDH2P40926 338 aaKnown RBP4.01□□□□□ -1.77
ATXN3-229ENST00000554672 CSNK1A1P48729 337 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 MTNR1BP49286 362 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 MMP15P51511 669 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 SEC61A1P61619 476 aaKnown RBP4.01□□□□□ -1.77
ATXN3-229ENST00000554672 BTG1P62324 171 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 EMX2Q04743 252 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 GLO1Q04760 184 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 MAD2L1Q13257 205 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-229ENST00000554672 SYPL1Q16563 259 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 WHAMMP3Q1A5X7 153 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 SLC36A2Q495M3 483 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 TTMPQ5BVD1 217 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 THEM4Q5T1C6 240 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 FAM69AQ5T7M9 428 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 GPR157Q5UAW9 335 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 ATG16L1Q676U5 607 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 C5orf46Q6UWT4 87 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 NHLRC1Q6VVB1 395 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 BRD3OSQ6XYD6 125 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 GDPGP1Q6ZNW5 385 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 MUC20Q8N307 709 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-229ENST00000554672 MIER2Q8N344 545 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 LNX2Q8N448 690 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 SLC22A24Q8N4F4 322 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 ZNF283Q8N7M2 679 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 CCDC63Q8NA47 563 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 ZSCAN4Q8NAM6 433 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-229ENST00000554672 NOA1Q8NC60 698 aaKnown RBP4.01□□□□□ -1.77
ATXN3-229ENST00000554672 ICA1LQ8NDH6 482 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 ADPRHL1Q8NDY3 354 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 OR8J2Q8NGG1 315 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 OR1J1Q8NGS3 322 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 SGCDQ92629 289 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 SLC38A4Q969I6 547 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 TAAR8Q969N4 342 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 TXNDC15Q96J42 360 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 PLEKHA8Q96JA3 519 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 SAMD8Q96LT4 415 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 C1orf50Q9BV19 199 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 SPATA5L1Q9BVQ7 753 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 OR51B6Q9H340 312 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 ARMC7Q9H6L4 198 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 C12orf10Q9HB07 376 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 A4GALTQ9NPC4 353 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 TBCCD1Q9NVR7 557 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 C14orf119Q9NWQ9 140 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 VSX1Q9NZR4 365 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-229ENST00000554672 GIMAP2Q9UG22 337 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 MIOXQ9UGB7 285 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 LRCH1Q9Y2L9 728 aa4.01□□□□□ -1.77
ATXN3-229ENST00000554672 TRAV36DV7A0A075B6V5 113 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 ZSCAN5BA6NJL1 495 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 CEACAM18A8MTB9 384 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 TNFRSF13BO14836 293 aaPredicted RBP4□□□□□ -1.77
ATXN3-229ENST00000554672 XPNPEP2O43895 674 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 ZNF500O60304 480 aaPredicted RBP4□□□□□ -1.77
ATXN3-229ENST00000554672 TSPAN9O75954 239 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 HPRP00739 348 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 ABHD2P08910 425 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 OSMP13725 252 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 PRG2P13727 222 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 HLA-DOBP13765 273 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 NQO1P15559 274 aaKnown RBP4□□□□□ -1.77
ATXN3-229ENST00000554672 CCNOP22674 350 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 TNFSF4P23510 183 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 AHCYP23526 432 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 CASQ1P31415 396 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 APLNRP35414 380 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 TNFAIP6P98066 277 aaPredicted RBP4□□□□□ -1.77
ATXN3-229ENST00000554672 BST1Q10588 318 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 CASP8Q14790 479 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 ZMYND11Q15326 602 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 LIN52Q52LA3 116 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 SPRNQ5BIV9 151 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 XKR7Q5GH72 579 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 SLC27A4Q6P1M0 643 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 WDR88Q6ZMY6 472 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 ZNF836Q6ZNA1 936 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 Q6ZSV7 163 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 Q6ZTK2 550 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 SLC16A14Q7RTX9 510 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 PXKQ7Z7A4 578 aa4□□□□□ -1.77
ATXN3-229ENST00000554672 ZER1Q7Z7L7 766 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms