RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 MRPS18BQ9Y676 258 aaKnown RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 A0A087WV48 116 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 DAPL1A0PJW8 107 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 ZC3H12DA2A288 527 aaKnown RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 AQP7P3A6NL99 342 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 A8MVM7 634 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 DLGAP3O95886 979 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 DHFRP00374 187 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 IFNA7P01567 189 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 SYPP08247 313 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 SLC2A1P11166 492 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 FUT1P19526 365 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 DTYMKP23919 212 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 TLX1P31314 330 aaPredicted RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 CTNNB1P35222 781 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 CBX5P45973 191 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 SOX9P48436 509 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 CSTF1Q05048 431 aaKnown RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 MFGE8Q08431 387 aaPredicted RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 PRDX4Q13162 271 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 GPM6BQ13491 265 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 RAB30Q15771 203 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 VWC2Q2TAL6 325 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 PRRT3Q5FWE3 981 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 RAB12Q6IQ22 244 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 TMUB2Q71RG4 321 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 LYG2Q86SG7 212 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF295-AS1Q8N0V1 137 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 ARRDC1Q8N5I2 433 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF511Q8NB15 262 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 OR1J4Q8NGS1 313 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 M1APQ8TC57 530 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 CEP19Q96LK0 163 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 Q96M85 177 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 DMRTB1Q96MA1 342 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 BBS4Q96RK4 519 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 CCDC3Q9BQI4 270 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 NUDT9Q9BW91 350 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 SF3B5Q9BWJ5 86 aaKnown RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 TBL1XR1Q9BZK7 514 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 LPAR5Q9H1C0 372 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 WDR13Q9H1Z4 485 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 PPA2Q9H2U2 334 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 TMEM27Q9HBJ8 222 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 NLKQ9UBE8 527 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 PURGQ9UJV8 347 aaKnown RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 DKKL1Q9UK85 242 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF346Q9UL40 294 aaKnown RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 CA14Q9ULX7 337 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 LHFPL6Q9Y693 200 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 UTRNP46939 3433 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 LOC100506127A0A0U1RQW1 187 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 A0A1W2PP55 124 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 TMEM82A0PJX8 343 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 TUSC2O75896 110 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 IGHV2-5P01817 119 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 AKAIN1P0CW23 69 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 ST6GAL1P15907 406 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 S100A11P31949 105 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 HTR2BP41595 481 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 PTGFRP43088 359 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 RAD52P43351 418 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 EFNB2P52799 333 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 ART1P52961 327 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 TAS2R19P59542 299 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 PSMA6P60900 246 aaKnown RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 OPCMLQ14982 345 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 GPR162Q16538 588 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 KLK9Q2XQG4 91 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 SMUG1Q53HV7 270 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 CDCP2Q5VXM1 449 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 PLET1Q6UQ28 207 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 DPPA3Q6W0C5 159 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 KCTD9Q7L273 389 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 NDUFAF7Q7L592 441 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 OLIG3Q7RTU3 272 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 ANKRD37Q7Z713 158 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 TAF8Q7Z7C8 310 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 LINC00596Q86U02 117 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 WDR5BQ86VZ2 330 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 CCDC28AQ8IWP9 274 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 C20orf196Q8IYI0 205 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 GABRG1Q8N1C3 465 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 CAMKK1Q8N5S9 505 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 C12orf76Q8N812 135 aaPredicted RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 OR2M3Q8NG83 312 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 OR4K15Q8NH41 348 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 RPLP0P6Q8NHW5 317 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 SUN5Q8TC36 379 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 PIGTQ969N2 578 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 ZBTB8AQ96BR9 441 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 RCC1LQ96I51 464 aaKnown RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 PTCHD1Q96NR3 888 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 PSMG3-AS1Q96PY0 264 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 OR14A2Q96R54 314 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.05□□□□□ -1.92
SEC23A-207ENST00000554615 PLEKHA2Q9HB19 425 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 PRDM6Q9NQX0 595 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 RXFP3Q9NSD7 469 aa3.05□□□□□ -1.92
SEC23A-207ENST00000554615 TREM2Q9NZC2 230 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms