RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 POMPQ9Y244 141 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 FKBP7Q9Y680 259 aa16.5■□□□□ 0.23
PTCH1-227ENST00000553256 JMJD1CQ15652 2540 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 LOC390937A0A1W2PQ73 354 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 M0R233 179 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 GSC2O15499 205 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 CCNB2O95067 398 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 IGHV3-13P01766 116 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 TFP02787 698 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 NR4A2P43354 598 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 PDLIM4P50479 330 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 RIN1Q13671 783 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 GK3PQ14409 553 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 RSPO1Q2MKA7 263 aaPredicted RBP16.49■□□□□ 0.23
PTCH1-227ENST00000553256 TMEM249Q2WGJ8 235 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 KRTAP27-1Q3LI81 207 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 AQP11Q8NBQ7 271 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 SLC26A10Q8NG04 563 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 OR4K13Q8NH42 304 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 ZNRF4Q8WWF5 429 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 IFT27Q9BW83 186 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 LHFPL6Q9Y693 200 aa16.49■□□□□ 0.23
PTCH1-227ENST00000553256 C5orf49A4QMS7 147 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 GYG2O15488 501 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 CD5LO43866 347 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 NCR1O76036 304 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 HPXP02790 462 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 SCRN3Q0VDG4 424 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 AQP6Q13520 282 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 MBNL2Q5VZF2 373 aaKnown RBP16.48■□□□□ 0.23
PTCH1-227ENST00000553256 LEG1Q6P5S2 330 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 LNX2Q8N448 690 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 OR4Q3Q8NH05 313 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 NIPSNAP1Q9BPW8 284 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 LRMDAQ9H2I8 198 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 OR51B6Q9H340 312 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 TPK1Q9H3S4 243 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 MS4A5Q9H3V2 200 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 ASH2LQ9UBL3 628 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 KLHL21Q9UJP4 597 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 SAMHD1Q9Y3Z3 626 aaKnown RBP16.48■□□□□ 0.23
PTCH1-227ENST00000553256 U3KQV3 271 aa16.48■□□□□ 0.23
PTCH1-227ENST00000553256 ABCA2Q9BZC7 2435 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 IGHV4-61A0A0C4DH41 118 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 DHRS12A0PJE2 317 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 ARRDC5A6NEK1 342 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 DNAJC8O75937 253 aaPredicted RBP16.47■□□□□ 0.23
PTCH1-227ENST00000553256 DAOP14920 347 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 CRABP1P29762 137 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 GGT2P36268 569 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 MPV17P39210 176 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 GDI2P50395 445 aaKnown RBP16.47■□□□□ 0.23
PTCH1-227ENST00000553256 MMP15P51511 669 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 COX10Q12887 443 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 MEP1BQ16820 701 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 RPL13AP3Q6NVV1 102 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 ALDH16A1Q8IZ83 802 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 OR1J1Q8NGS3 322 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 SYNPRQ8TBG9 265 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 GTF3AQ92664 365 aaKnown RBP16.47■□□□□ 0.23
PTCH1-227ENST00000553256 C4orf45Q96LM5 186 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 NMNAT2Q9BZQ4 307 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 POFUT1Q9H488 388 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 REEP1Q9H902 201 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 DYNLRB1Q9NP97 96 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 MRPL22Q9NWU5 206 aaKnown RBP16.47■□□□□ 0.23
PTCH1-227ENST00000553256 ATPIF1Q9UII2 106 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 DUSP13Q9UII6 198 aa16.47■□□□□ 0.23
PTCH1-227ENST00000553256 INAFM1C9JVW0 142 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 RER1O15258 196 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 SGCEO43556 437 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 TACSTD2P09758 323 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 NAT2P11245 290 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 PSKH1P11801 424 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 USF1P22415 310 aaPredicted RBP16.46■□□□□ 0.23
PTCH1-227ENST00000553256 GUCA1AP43080 201 aaPredicted RBP16.46■□□□□ 0.23
PTCH1-227ENST00000553256 KLF3P57682 345 aaPredicted RBP16.46■□□□□ 0.23
PTCH1-227ENST00000553256 CLEC12AQ5QGZ9 265 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 SDR9C7Q8NEX9 313 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 OR52E2Q8NGJ4 325 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 SLC25A40Q8TBP6 338 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 KLF14Q8TD94 323 aaPredicted RBP16.46■□□□□ 0.23
PTCH1-227ENST00000553256 SLC7A6Q92536 515 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 RBM4Q9BWF3 364 aaKnown RBP16.46■□□□□ 0.23
PTCH1-227ENST00000553256 BPESC1Q9GZL8 116 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 FN3KQ9H479 309 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 NTN4Q9HB63 628 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 SRA1Q9HD15 236 aaKnown RBP16.46■□□□□ 0.23
PTCH1-227ENST00000553256 PNRC2Q9NPJ4 139 aaKnown RBP16.46■□□□□ 0.23
PTCH1-227ENST00000553256 RPRD1BQ9NQG5 326 aaKnown RBP16.46■□□□□ 0.23
PTCH1-227ENST00000553256 TBCCD1Q9NVR7 557 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 NKIRAS2Q9NYR9 191 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 TAAR3PQ9P1P4 343 aa16.46■□□□□ 0.23
PTCH1-227ENST00000553256 NDRG4Q9ULP0 352 aaKnown RBP16.46■□□□□ 0.23
PTCH1-227ENST00000553256 C17orf100A8MU93 164 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 LYNX1G3V0Z9 82 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 H3BSA7 217 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 LILRA1O75019 489 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 RP2O75695 350 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 LCKP06239 509 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms