RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 PPP1CBP62140 327 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 MRPS11P82912 194 aaKnown RBP13.55□□□□□ -0.24
CDK4-215ENST00000553237 SRSF2Q01130 221 aaKnown RBP13.55□□□□□ -0.24
CDK4-215ENST00000553237 MS4A2Q01362 244 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 KRR1Q13601 381 aaKnown RBP13.55□□□□□ -0.24
CDK4-215ENST00000553237 TRIM25Q14258 630 aaKnown RBP13.55□□□□□ -0.24
CDK4-215ENST00000553237 PCGF3Q3KNV8 242 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 SPATA3Q8NHX4 192 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 KLF14Q8TD94 323 aaPredicted RBP13.55□□□□□ -0.24
CDK4-215ENST00000553237 IPCEF1Q8WWN9 437 aaPredicted RBP13.55□□□□□ -0.24
CDK4-215ENST00000553237 RSRC1Q96IZ7 334 aaKnown RBP13.55□□□□□ -0.24
CDK4-215ENST00000553237 CLPTM1LQ96KA5 538 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 DHRS1Q96LJ7 313 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 C4orf45Q96LM5 186 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 GPA33Q99795 319 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 LPAR2Q9HBW0 351 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 DECR2Q9NUI1 292 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 IER3IP1Q9Y5U9 82 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 MXRA5Q9NR99 2828 aa13.55□□□□□ -0.24
CDK4-215ENST00000553237 UNC119BA6NIH7 251 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 AHCYL1O43865 530 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 SLC16A7O60669 478 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 MPZL1O95297 269 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 MT-ND5P03915 603 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 FABP3P05413 133 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 SDHAP31040 664 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 SMIM11AP58511 58 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 FXYD6P3P58550 94 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 SPIBQ01892 262 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 MVKQ03426 396 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 AVPI1Q5T686 147 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 UNQ6126/PRO20091Q6UXV3 157 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 USP51Q70EK9 711 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 SYT9Q86SS6 491 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 DHFR2Q86XF0 187 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 PHC2Q8IXK0 858 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 TMEM158Q8WZ71 300 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 CCDC124Q96CT7 223 aaKnown RBP13.54□□□□□ -0.24
CDK4-215ENST00000553237 C1orf159Q96HA4 380 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 THTPAQ9BU02 230 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 RACGAP1Q9H0H5 632 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 SYT4Q9H2B2 425 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 MUC13Q9H3R2 512 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 IL1RAPQ9NPH3 570 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 NRIP3Q9NQ35 241 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 NKIRAS2Q9NYR9 191 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 TMEFF2Q9UIK5 374 aaPredicted RBP13.54□□□□□ -0.24
CDK4-215ENST00000553237 COA3Q9Y2R0 106 aaPredicted RBP13.54□□□□□ -0.24
CDK4-215ENST00000553237 CACNG2Q9Y698 323 aa13.54□□□□□ -0.24
CDK4-215ENST00000553237 IGHV1-69-2A0A0G2JMI3 117 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 TCRBV5S2A0A599 114 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 B4DSR2 109 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 FAM157AC9JC47 383 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 GYG2O15488 501 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 KHDRBS3O75525 346 aaKnown RBP13.53□□□□□ -0.24
CDK4-215ENST00000553237 GADD45GO95257 159 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 CDKN2AP42771 156 aaKnown RBP13.53□□□□□ -0.24
CDK4-215ENST00000553237 HTR5AP47898 357 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 MTX3Q5HYI7 312 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 MBNL2Q5VZF2 373 aaKnown RBP13.53□□□□□ -0.24
CDK4-215ENST00000553237 GPR139Q6DWJ6 353 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 LCN8Q6JVE9 175 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 PTCHD4Q6ZW05 846 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 ZDHHC21Q8IVQ6 265 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 GPX7Q96SL4 187 aaPredicted RBP13.53□□□□□ -0.24
CDK4-215ENST00000553237 FUZQ9BT04 418 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 ELOVL3Q9HB03 270 aa13.53□□□□□ -0.24
CDK4-215ENST00000553237 KRCC1Q9NPI7 259 aaPredicted RBP13.53□□□□□ -0.24
CDK4-215ENST00000553237 PLSCR5A0PG75 271 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 ZSCAN5BA6NJL1 495 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 SGCEO43556 437 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 DOK2O60496 412 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 PPP1R3DO95685 299 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 ABHD16AO95870 558 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 GPANK1O95872 356 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 IGHV1-46P01743 117 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 RRM2P31350 389 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 CRYBB2P43320 205 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 CENPAP49450 140 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 MMP15P51511 669 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 ARHGDIAP52565 204 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 DVL1P1P54792 670 aaPredicted RBP13.52□□□□□ -0.25
CDK4-215ENST00000553237 TEKQ02763 1124 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 SCRN3Q0VDG4 424 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 ARL9Q6T311 187 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 DPY19L2P2Q6ZN68 376 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 ZER1Q7Z7L7 766 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.52□□□□□ -0.25
CDK4-215ENST00000553237 GLB1L2Q8IW92 636 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 SLC7A6Q92536 515 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 SLC7A6OSQ96CW6 309 aaPredicted RBP13.52□□□□□ -0.25
CDK4-215ENST00000553237 ASB9Q96DX5 294 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 TSSK2Q96PF2 358 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 NUAK2Q9H093 628 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 POFUT1Q9H488 388 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 SAP30LQ9HAJ7 183 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 MSL2Q9HCI7 577 aa13.52□□□□□ -0.25
CDK4-215ENST00000553237 VSX1Q9NZR4 365 aaPredicted RBP13.52□□□□□ -0.25
CDK4-215ENST00000553237 NDRG4Q9ULP0 352 aaKnown RBP13.52□□□□□ -0.25
CDK4-215ENST00000553237 GRIP1Q9Y3R0 1128 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms