RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 WNT5BQ9H1J7 359 aa18.44■□□□□ 0.54
VPS29-206ENST00000549578 NGBQ9NPG2 151 aa18.44■□□□□ 0.54
VPS29-206ENST00000549578 CRNNQ9UBG3 495 aaPredicted RBP18.44■□□□□ 0.54
VPS29-206ENST00000549578 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.44■□□□□ 0.54
VPS29-206ENST00000549578 HSPE1-MOB4S4R3N1 261 aa18.44■□□□□ 0.54
VPS29-206ENST00000549578 IGLV1-44P01699 117 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 ZNF14P17017 642 aaPredicted RBP18.43■□□□□ 0.54
VPS29-206ENST00000549578 GGTLC2Q14390 218 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 PCK2Q16822 640 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 TEX30Q5JUR7 227 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 TMEM154Q6P9G4 183 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 THAP5Q7Z6K1 395 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 CPEB3Q8NE35 698 aaKnown RBP18.43■□□□□ 0.54
VPS29-206ENST00000549578 OR51G2Q8NGK0 314 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 OR2AJ1Q8NGZ0 328 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 Q96MT0 163 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 CNN2Q99439 309 aaKnown RBP18.43■□□□□ 0.54
VPS29-206ENST00000549578 WACQ9BTA9 647 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 ANKRD60Q9BZ19 345 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 ADGRL4Q9HBW9 690 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 SLC24A3Q9HC58 644 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 AMBNQ9NP70 447 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 HAO2Q9NYQ3 351 aa18.43■□□□□ 0.54
VPS29-206ENST00000549578 GDF2Q9UK05 429 aaPredicted RBP18.43■□□□□ 0.54
VPS29-206ENST00000549578 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.42■□□□□ 0.54
VPS29-206ENST00000549578 CECR9P0C854 216 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 HCCSP53701 268 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 HIST2H2BCQ6DN03 193 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 SHFQ7M4L6 423 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 SLC16A9Q7RTY1 509 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 DCXRQ7Z4W1 244 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 FAM169BQ8N8A8 192 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 GJC3Q8NFK1 279 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 PLPPR2Q96GM1 343 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 MAP6Q96JE9 813 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 MOV10Q9HCE1 1003 aaKnown RBP18.42■□□□□ 0.54
VPS29-206ENST00000549578 PLEK2Q9NYT0 353 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 KCNN3Q9UGI6 736 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 RAB26Q9ULW5 256 aa18.42■□□□□ 0.54
VPS29-206ENST00000549578 DPRXA6NFQ7 191 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 DEFB108AA8MXU0 73 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 SGCEO43556 437 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 DOK2O60496 412 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 TMCC2O75069 709 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 SERPINA5P05154 406 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 PAX7P23759 505 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 APEX1P27695 318 aaKnown RBP18.41■□□□□ 0.54
VPS29-206ENST00000549578 MTNR1AP48039 350 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 HIST1H3AP68431 136 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 PLP2Q04941 152 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 ZNF91Q05481 1191 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 BSPH1Q075Z2 132 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 CDK5R2Q13319 367 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 CCDC92Q53HC0 331 aaPredicted RBP18.41■□□□□ 0.54
VPS29-206ENST00000549578 HIST2H3PS2Q5TEC6 136 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 HIST2H3AQ71DI3 136 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 VASH1Q7L8A9 365 aaPredicted RBP18.41■□□□□ 0.54
VPS29-206ENST00000549578 FBLIM1Q8WUP2 373 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 RNFT2Q96EX2 444 aa18.41■□□□□ 0.54
VPS29-206ENST00000549578 SNTNA6NMZ2 147 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 SBK2P0C263 348 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 DBTP11182 482 aaKnown RBP18.4■□□□□ 0.54
VPS29-206ENST00000549578 MYF6P23409 242 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 CD40P25942 277 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 SPOCK1Q08629 439 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 TMED1Q13445 227 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 EIF2B1Q14232 305 aaKnown RBP18.4■□□□□ 0.54
VPS29-206ENST00000549578 BEX5Q5H9J7 111 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 LAIR2Q6ISS4 152 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 TMEM108Q6UXF1 575 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 OR4F15Q8NGB8 312 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 OTOSQ8NHW6 89 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 PIK3IP1Q96FE7 263 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 CNBD2Q96M20 576 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 KLHDC2Q9Y2U9 406 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 CADP27708 2225 aa18.4■□□□□ 0.54
VPS29-206ENST00000549578 IQCMA0A1B0GVH7 501 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 CCL2P13500 99 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 ATP6V1E1P36543 226 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 DAZAP2Q15038 168 aaPredicted RBP18.39■□□□□ 0.54
VPS29-206ENST00000549578 C3orf36Q3SXR2 165 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 CDC20BQ86Y33 519 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 ALDH16A1Q8IZ83 802 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 OR10S1Q8NGN2 331 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 ST7LQ8TDW4 575 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 HS3ST6Q96QI5 342 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 AMELYQ99218 206 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 YIPF3Q9GZM5 350 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 C1orf198Q9H425 327 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 ESRP2Q9H6T0 727 aaKnown RBP18.39■□□□□ 0.54
VPS29-206ENST00000549578 PNRC2Q9NPJ4 139 aaKnown RBP18.39■□□□□ 0.54
VPS29-206ENST00000549578 FBXL3Q9UKT7 428 aa18.39■□□□□ 0.54
VPS29-206ENST00000549578 RTTNQ86VV8 2226 aa18.39■□□□□ 0.53
VPS29-206ENST00000549578 SYNGR3O43761 229 aa18.39■□□□□ 0.53
VPS29-206ENST00000549578 PTAFRP25105 342 aa18.39■□□□□ 0.53
VPS29-206ENST00000549578 LOXP28300 417 aaPredicted RBP18.39■□□□□ 0.53
VPS29-206ENST00000549578 HTR5AP47898 357 aa18.39■□□□□ 0.53
VPS29-206ENST00000549578 NAAAQ02083 359 aa18.39■□□□□ 0.53
VPS29-206ENST00000549578 POU4F2Q12837 409 aa18.39■□□□□ 0.53
VPS29-206ENST00000549578 RAB35Q15286 201 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms