RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 NPEPL1Q8NDH3 523 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 SLC7A13Q8TCU3 470 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 ZNF570Q96NI8 536 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 GAL3ST1Q99999 423 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 EGLN1Q9GZT9 426 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 ANKRD19PQ9H560 264 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 ELOVL3Q9HB03 270 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 MSL2Q9HCI7 577 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 DCAF16Q9NXF7 216 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 GRHPRQ9UBQ7 328 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 TEX13CA0A0J9YWL9 993 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 PRSS37A4D1T9 235 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 J3QLI3 93 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 ABHD16AO95870 558 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 HTR5AP47898 357 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 LIMS1P48059 325 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 ARHGDIAP52565 204 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 HILS1P60008 231 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 SCRN3Q0VDG4 424 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 PSG7Q13046 419 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 ZBED5Q49AG3 693 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 MTX3Q5HYI7 312 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 FKBP9P1Q75LS8 142 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 ZNF771Q7L3S4 317 aaPredicted RBP14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 VASH1Q7L8A9 365 aaPredicted RBP14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 TREML1Q86YW5 311 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 ZNF418Q8TF45 676 aaPredicted RBP14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 FAM46AQ96IP4 442 aaKnown RBP14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 DIRC2Q96SL1 478 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 HOPXQ9BPY8 73 aaPredicted RBP14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 WACQ9BTA9 647 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 NMNAT1Q9HAN9 279 aaPredicted RBP14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 ZDHHC8Q9ULC8 765 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 TMEM5Q9Y2B1 443 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 ENPP4Q9Y6X5 453 aa14.72□□□□□ -0.05
CHMP1A-205ENST00000548650 ISPDA4D126 451 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 XKRYO14609 159 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 GSTA4O15217 222 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 SGCEO43556 437 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 AHCYL1O43865 530 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 TIMM8AO60220 97 aaPredicted RBP14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 ADRA2CP18825 462 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 GSTM3P21266 225 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 NUDT2P50583 147 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 TNFAIP6P98066 277 aaPredicted RBP14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 SLC3A1Q07837 685 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 AQP6Q13520 282 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 KRR1Q13601 381 aaKnown RBP14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 DCAF12L2Q5VW00 463 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 ARL9Q6T311 187 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 HACD2Q6Y1H2 254 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 USP43Q70EL4 1123 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 RASD2Q96D21 266 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 GPX7Q96SL4 187 aaPredicted RBP14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 TBCCD1Q9NVR7 557 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 ABCD2Q9UBJ2 740 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 SIGLEC7Q9Y286 467 aa14.71□□□□□ -0.05
CHMP1A-205ENST00000548650 A0A1W2PRQ8 180 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 FSHBP01225 129 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 IGHV2-70P01814 119 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 NCK1P16333 377 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 KITLGP21583 273 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 RBMXP38159 391 aaKnown RBP14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 FXYD6P3P58550 94 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 CDK5R2Q13319 367 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 DGCR6Q14129 220 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 OTPQ5XKR4 325 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 Q6ZR03 302 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 ZER1Q7Z7L7 766 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 CYP4Z1Q86W10 505 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 FAM162AQ96A26 154 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 KCTD14Q9BQ13 255 aaPredicted RBP14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 NDEL1Q9GZM8 345 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 SYT4Q9H2B2 425 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 NRIP3Q9NQ35 241 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 UBAP1Q9NZ09 502 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 OPN4Q9UHM6 478 aa14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 PURGQ9UJV8 347 aaKnown RBP14.7□□□□□ -0.06
CHMP1A-205ENST00000548650 OR6C6A6NF89 314 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 IMPA2O14732 288 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 CCDC22O60826 627 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 NDUFB2O95178 105 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 H1F0P07305 194 aaKnown RBP14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 GATA3P23771 443 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 SDHAP31040 664 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 OMPP47874 163 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 ERFP50548 548 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 LCN2P80188 198 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 HSP90B2PQ58FF3 399 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 C12orf54Q6X4T0 127 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 ADCK1Q86TW2 530 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 SLC7A6Q92536 515 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 RSRC1Q96IZ7 334 aaKnown RBP14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 SLC6A7Q99884 636 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 EFCAB1Q9HAE3 211 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 TMEM106BQ9NUM4 274 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 PLEK2Q9NYT0 353 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 VSX1Q9NZR4 365 aaPredicted RBP14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 NDUFAF4Q9P032 175 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 ASH2LQ9UBL3 628 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms