RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ELAC2Q9BQ52 826 aaKnown RBP11.31□□□□□ -0.6
CPSF6-204ENST00000547486 MYLK2Q9H1R3 596 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 ANKRD19PQ9H560 264 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 OCEL1Q9H607 264 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 NRIP3Q9NQ35 241 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 DCAF16Q9NXF7 216 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 ABCD2Q9UBJ2 740 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 SIGLEC7Q9Y286 467 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 LOC105371242A0A075B767 164 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 TEX13CA0A0J9YWL9 993 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 TRBV4-1A0A0J9YWV2 114 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 SLC16A7O60669 478 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 RGS9O75916 674 aaPredicted RBP11.3□□□□□ -0.6
CPSF6-204ENST00000547486 DIRAS1O95057 198 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 PNPP00491 289 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 H1F0P07305 194 aaKnown RBP11.3□□□□□ -0.6
CPSF6-204ENST00000547486 ADH4P08319 380 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 ANPEPP15144 967 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 ARHGDIAP52565 204 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 DBPQ10586 325 aaPredicted RBP11.3□□□□□ -0.6
CPSF6-204ENST00000547486 CDK5R2Q13319 367 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 GLYATQ6IB77 296 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 Q6ZR03 302 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 VASH1Q7L8A9 365 aaPredicted RBP11.3□□□□□ -0.6
CPSF6-204ENST00000547486 RRM2BQ7LG56 351 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 CYP4Z1Q86W10 505 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 C1orf174Q8IYL3 243 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 RNF148Q8N7C7 305 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.3□□□□□ -0.6
CPSF6-204ENST00000547486 RAB1CQ92928 201 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 ELMOD3Q96FG2 381 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 ZNF570Q96NI8 536 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 FUZQ9BT04 418 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 TMPRSS13Q9BYE2 586 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 RERGLQ9H628 205 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 ELOVL3Q9HB03 270 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 CYSLTR2Q9NS75 346 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 DCAF13Q9NV06 445 aaKnown RBP11.3□□□□□ -0.6
CPSF6-204ENST00000547486 TBCCD1Q9NVR7 557 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 ZDHHC8Q9ULC8 765 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 COA3Q9Y2R0 106 aaPredicted RBP11.3□□□□□ -0.6
CPSF6-204ENST00000547486 STARD10Q9Y365 291 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 IER3IP1Q9Y5U9 82 aa11.3□□□□□ -0.6
CPSF6-204ENST00000547486 SOCS2O14508 198 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 XKRYO14609 159 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 SGCEO43556 437 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 AHCYL1O43865 530 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 DOK2O60496 412 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 NDUFB2O95178 105 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 ABHD16AO95870 558 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 GPANK1O95872 356 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 CD55P08174 381 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 COX5BP10606 129 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 LIPAP38571 399 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 CDKN2AP42771 156 aaKnown RBP11.29□□□□□ -0.6
CPSF6-204ENST00000547486 HTR5AP47898 357 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 ERFP50548 548 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 KRR1Q13601 381 aaKnown RBP11.29□□□□□ -0.6
CPSF6-204ENST00000547486 CCDC92Q53HC0 331 aaPredicted RBP11.29□□□□□ -0.6
CPSF6-204ENST00000547486 HSP90B2PQ58FF3 399 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 MTX3Q5HYI7 312 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 PTCHD4Q6ZW05 846 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 SEMA6DQ8NFY4 1073 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 OR52J3Q8NH60 311 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 CMBLQ96DG6 245 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 GPX7Q96SL4 187 aaPredicted RBP11.29□□□□□ -0.6
CPSF6-204ENST00000547486 WACQ9BTA9 647 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 EGLN1Q9GZT9 426 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 NUAK2Q9H093 628 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 SYT4Q9H2B2 425 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 MED4Q9NPJ6 270 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 PURGQ9UJV8 347 aaKnown RBP11.29□□□□□ -0.6
CPSF6-204ENST00000547486 RPS6KA6Q9UK32 745 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 NDRG4Q9ULP0 352 aaKnown RBP11.29□□□□□ -0.6
CPSF6-204ENST00000547486 TMEM5Q9Y2B1 443 aa11.29□□□□□ -0.6
CPSF6-204ENST00000547486 H3BSA7 217 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 NDUFAB1O14561 156 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 TIMM8AO60220 97 aaPredicted RBP11.28□□□□□ -0.6
CPSF6-204ENST00000547486 KHDRBS3O75525 346 aaKnown RBP11.28□□□□□ -0.6
CPSF6-204ENST00000547486 DBHP09172 617 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 RHCEP18577 417 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 ADRA2CP18825 462 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 ZFP36P26651 326 aaKnown RBP11.28□□□□□ -0.6
CPSF6-204ENST00000547486 SDHAP31040 664 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 TNFAIP6P98066 277 aaPredicted RBP11.28□□□□□ -0.6
CPSF6-204ENST00000547486 SCRN3Q0VDG4 424 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 FGD3Q5JSP0 725 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 SHQ1Q6PI26 577 aaKnown RBP11.28□□□□□ -0.6
CPSF6-204ENST00000547486 ARL9Q6T311 187 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 GLB1L2Q8IW92 636 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 HAVCR1Q96D42 359 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 RAB39BQ96DA2 213 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 CMTM5Q96DZ9 223 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 TIMD4Q96H15 378 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 RSRC1Q96IZ7 334 aaKnown RBP11.28□□□□□ -0.6
CPSF6-204ENST00000547486 DHRS1Q96LJ7 313 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 TSSK2Q96PF2 358 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 DCLRE1CQ96SD1 692 aaKnown RBP11.28□□□□□ -0.6
CPSF6-204ENST00000547486 GAL3ST1Q99999 423 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 ADA2Q9NZK5 511 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms