RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 IFNA14P01570 189 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 MT-ND5P03915 603 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 SCG5P05408 212 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 CST2P09228 141 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 ADRA2CP18825 462 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 YAP1P46937 504 aaKnown RBP7.17□□□□□ -1.26
USP28-215ENST00000545608 ARFIP2P53365 341 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 HILS1P60008 231 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 RPL27P61353 136 aaKnown RBP7.17□□□□□ -1.26
USP28-215ENST00000545608 PPP1CBP62140 327 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 SELENOWP63302 87 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 ST3GAL3Q11203 375 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 FHL1Q13642 323 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 ENDOGQ14249 297 aaKnown RBP7.17□□□□□ -1.26
USP28-215ENST00000545608 TAF11Q15544 211 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 HFEQ30201 348 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 LRRC23Q53EV4 343 aaPredicted RBP7.17□□□□□ -1.26
USP28-215ENST00000545608 COQ5Q5HYK3 327 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 FAM209AQ5JX71 171 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 MBNL2Q5VZF2 373 aaKnown RBP7.17□□□□□ -1.26
USP28-215ENST00000545608 ZNF774Q6NX45 483 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 FOXL2NBQ6ZUU3 175 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 C1QL2Q7Z5L3 287 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 PEG10Q86TG7 708 aaKnown RBP7.17□□□□□ -1.26
USP28-215ENST00000545608 MICU2Q8IYU8 434 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 OR51A7Q8NH64 312 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 ABHD4Q8TB40 342 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 RAB1CQ92928 201 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 BPIFA2Q96DR5 249 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 ELMOD3Q96FG2 381 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 TPD52L3Q96J77 140 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 PRRC1Q96M27 445 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 RBP7Q96R05 134 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 ALG12Q9BV10 488 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 PLA2G12AQ9BZM1 189 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 MSL2Q9HCI7 577 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 SAR1AQ9NR31 198 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 DCAF16Q9NXF7 216 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 RHCGQ9UBD6 479 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 OPN4Q9UHM6 478 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 TIMM10BQ9Y5J6 103 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 SNX13Q9Y5W8 968 aa7.17□□□□□ -1.26
USP28-215ENST00000545608 A0A0G2JMP0 313 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 A0A0X1KG70 313 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 A0A1W2PPL8 197 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 TMEM89A2RUT3 159 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 ANKRD34BA5PLL1 514 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 FAM220BPB1ANY3 271 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 ANKRD65E5RJM6 399 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 H7C1C5 153 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 J3KTA2 159 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 FFAR1O14842 300 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 IGHMP01871 453 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 ADH4P08319 380 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 MDH1P40925 334 aaKnown RBP7.16□□□□□ -1.26
USP28-215ENST00000545608 COMPP49747 757 aaPredicted RBP7.16□□□□□ -1.26
USP28-215ENST00000545608 LCN6P62502 163 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 ACTG1P63261 375 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 SCGB2A2Q13296 93 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 DCAF12L2Q5VW00 463 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 CGB2Q6NT52 195 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 USP43Q70EL4 1123 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 NRMQ8IXM6 262 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 OR2T12Q8NG77 320 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 OR4M2Q8NGB6 313 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 FAM216AQ8WUB2 273 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 GEMIN6Q8WXD5 167 aaKnown RBP7.16□□□□□ -1.26
USP28-215ENST00000545608 TIMD4Q96H15 378 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 C4orf45Q96LM5 186 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 GAL3ST1Q99999 423 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 POFUT1Q9H488 388 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 C7orf69Q9H7B7 122 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 MAN2C1Q9NTJ4 1040 aa7.16□□□□□ -1.26
USP28-215ENST00000545608 A0A087WUU8 490 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.15□□□□□ -1.26
USP28-215ENST00000545608 PLSCR5A0PG75 271 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 ELOVL7A1L3X0 281 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 ISPDA4D126 451 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 HTR3EA5X5Y0 456 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 GMNCA6NCL1 334 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 BBIP1A8MTZ0 92 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 EFCAB9A8MZ26 197 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 TRIM77I1YAP6 450 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 J3QLI3 93 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 FSHBP01225 129 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 CD55P08174 381 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 SBK2P0C263 348 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 NR2C1P13056 603 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 ZNF26P17031 533 aaPredicted RBP7.15□□□□□ -1.26
USP28-215ENST00000545608 MSR1P21757 451 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 ZFP36P26651 326 aaKnown RBP7.15□□□□□ -1.26
USP28-215ENST00000545608 LIPAP38571 399 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 GUCA1AP43080 201 aaPredicted RBP7.15□□□□□ -1.26
USP28-215ENST00000545608 PCBD1P61457 104 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 LCN2P80188 198 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 TNFAIP6P98066 277 aaPredicted RBP7.15□□□□□ -1.26
USP28-215ENST00000545608 PRKCDQ05655 676 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 PSG7Q13046 419 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 CDK5R2Q13319 367 aa7.15□□□□□ -1.26
USP28-215ENST00000545608 MAPRE2Q15555 327 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms