RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 NARS2Q96I59 477 aaKnown RBP3.05□□□□□ -1.92
COPA-206ENST00000545266 KCNJ16Q9NPI9 418 aa3.05□□□□□ -1.92
COPA-206ENST00000545266 VANGL2Q9ULK5 521 aa3.05□□□□□ -1.92
COPA-206ENST00000545266 IGKV6-21A0A0C4DH24 114 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 A0A1W2PQ67 120 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 FAM47DPA6NHR8 397 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 LRRIQ3A6PVS8 624 aaPredicted RBP3.04□□□□□ -1.92
COPA-206ENST00000545266 VAMP5O95183 116 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 LINC00869P0C866 280 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 ZNF286BP0CG31 522 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 ZNF24P17028 368 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 WARSP23381 471 aaKnown RBP3.04□□□□□ -1.92
COPA-206ENST00000545266 RND2P52198 227 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 PGGHGQ32M88 737 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 PTPN20Q4JDL3 420 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 ZNF684Q5T5D7 378 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 PLET1Q6UQ28 207 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 ZNF615Q8N8J6 731 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 ZNF709Q8N972 641 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 RGP1Q92546 391 aaPredicted RBP3.04□□□□□ -1.92
COPA-206ENST00000545266 ZNF75CPQ92670 426 aaPredicted RBP3.04□□□□□ -1.92
COPA-206ENST00000545266 CENPKQ9BS16 269 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 DDX19AQ9NUU7 478 aaKnown RBP3.04□□□□□ -1.92
COPA-206ENST00000545266 DDX18Q9NVP1 670 aaKnown RBP3.04□□□□□ -1.92
COPA-206ENST00000545266 UXTQ9UBK9 157 aaPredicted RBP3.04□□□□□ -1.92
COPA-206ENST00000545266 ZNF835Q9Y2P0 537 aa3.04□□□□□ -1.92
COPA-206ENST00000545266 AHDC1Q5TGY3 1603 aaPredicted RBP3.04□□□□□ -1.92
COPA-206ENST00000545266 C9JVG2 144 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 H0YC42 278 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 NDUFAB1O14561 156 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 BPY2O14599 106 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 NUPL2O15504 423 aaKnown RBP3.03□□□□□ -1.92
COPA-206ENST00000545266 SOCS1O15524 211 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 RBFOX2O43251 390 aaKnown RBP eCLIP3.03□□□□□ -1.92
COPA-206ENST00000545266 ANXA5P08758 320 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 RAB10P61026 200 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 TMED1Q13445 227 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 CUL2Q13617 745 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 ARMC12Q5T9G4 340 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 C9orf135Q5VTT2 229 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 UBE2UQ5VVX9 321 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 TMEM150AQ86TG1 271 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 SLC38A4Q969I6 547 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 NTAN1Q96AB6 310 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 TGS1Q96RS0 853 aaKnown RBP3.03□□□□□ -1.92
COPA-206ENST00000545266 PLIN2Q99541 437 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 CCDC77Q9BR77 488 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 NMRK1Q9NWW6 199 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 PCM1Q15154 2024 aa3.03□□□□□ -1.92
COPA-206ENST00000545266 TRBV9A0A0B4J1U6 114 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 FAM25EA8MYX2 175 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 SIRPB1O00241 398 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 CIB2O75838 187 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 OR2J3O76001 311 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 AQP8O94778 261 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 SERPINE2P07093 398 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 ADRA2AP08913 450 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 ATF6P18850 670 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 DCKP27707 260 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 SLC1A1P43005 524 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 CSNK1EP49674 416 aaKnown RBP3.02□□□□□ -1.93
COPA-206ENST00000545266 PRR3P79522 188 aaKnown RBP3.02□□□□□ -1.93
COPA-206ENST00000545266 QPRTQ15274 297 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 KRTAP13-2Q52LG2 175 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 AVPI1Q5T686 147 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 METTL21CQ5VZV1 264 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 PP632Q6XCG6 107 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 SHISA6Q6ZSJ9 500 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 HMGN2P46Q86SG4 172 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 ARRDC1Q8N5I2 433 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 NPWQ8N729 165 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 ZNF461Q8TAF7 563 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 DNAJC1Q96KC8 554 aaKnown RBP3.02□□□□□ -1.93
COPA-206ENST00000545266 CAMK2N2Q96S95 79 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 NCOR1P1Q9H4R4 102 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 TMEM165Q9HC07 324 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 HRASLS2Q9NWW9 162 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 CTSFQ9UBX1 484 aa3.02□□□□□ -1.93
COPA-206ENST00000545266 COL1A2P08123 1366 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 GAKO14976 1311 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 CTAGE15A4D2H0 777 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 LYRM9A8MSI8 78 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 AIM2O14862 343 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 RNF13O43567 381 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 OR2F2O95006 317 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 MPZL1O95297 269 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 CTSLP07711 333 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 CT45A6P0DMU7 189 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 CT45A5P0DMU8 189 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 CT45A7P0DMV0 189 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 NPY1RP25929 384 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 RRM2P31350 389 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 CEACAM3P40198 252 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 CDH17Q12864 832 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 ORMDL2Q53FV1 153 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 CT45A1Q5HYN5 189 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 FAM78AQ5JUQ0 283 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 LRRC66Q68CR7 880 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 C22orf42Q6IC83 251 aa3.01□□□□□ -1.93
COPA-206ENST00000545266 REEP3Q6NUK4 255 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms