RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 PSKH1P11801 424 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 CPN1P15169 458 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 IFNGR1P15260 489 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 SPI1P17947 270 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 EDNRAP25101 427 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 DDOSTP39656 456 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 MAP2K3P46734 347 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 RFX2P48378 723 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 PITPNBP48739 271 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 OR12D2P58182 307 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 RAC3P60763 192 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 RPL27P61353 136 aaKnown RBP6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 LCN6P62502 163 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 SLC35A1P78382 337 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 HSF1Q00613 529 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 SLC3A1Q07837 685 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 RIPPLY1Q0D2K3 151 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 MELKQ14680 651 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 SLC10A1Q14973 349 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 POU4F3Q15319 338 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 NDUFA5Q16718 116 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 ZMAT1Q5H9K5 638 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 SFXN4Q6P4A7 337 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 LYPD4Q6UWN0 246 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 B3GLCTQ6Y288 498 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 FAM220AQ7Z4H9 259 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 RPS4Y2Q8TD47 263 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 TSSK2Q96PF2 358 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 TBX5Q99593 518 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 C7orf50Q9BRJ6 194 aaKnown RBP6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 TRAF4Q9BUZ4 470 aaPredicted RBP6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 RNF121Q9H920 327 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 ZNF275Q9NSD4 429 aaPredicted RBP6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 MED29Q9NX70 200 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 COPZ2Q9P299 210 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 ST6GALNAC2Q9UJ37 374 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 TUBD1Q9UJT1 453 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 ZMIZ1Q9ULJ6 1067 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 FREM1Q5H8C1 2179 aa6.21□□□□□ -1.41
HMGCS2-204ENST00000544913 IGLV1-36A0A0B4J1U3 117 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 TRGV5A0A0B4J1U4 118 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 FAM240BA0A1B0GVZ2 78 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 TMEM8BA6NDV4 472 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 ACOT7O00154 380 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 TFECO14948 347 aaPredicted RBP6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 LYRM1O43325 122 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 ORC5O43913 435 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 SLC43A1O75387 559 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 ACTL6AO96019 429 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 RAF1P04049 648 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 MRPL3P09001 348 aaKnown RBP6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 UCHL1P09936 223 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 SPNP16150 400 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 GDI2P50395 445 aaKnown RBP6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 TDGF1P3P51864 188 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 SCAND1P57086 179 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 POU3F1Q03052 451 aaPredicted RBP6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 EGR3Q06889 387 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 HIST3H3Q16695 136 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 HSD17B12Q53GQ0 312 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 PRR30Q53SZ7 412 aaPredicted RBP6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 RSBN1Q5VWQ0 802 aaPredicted RBP6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 SLC35D2Q76EJ3 337 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 TMEM123Q8N131 208 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 OR6V1Q8N148 313 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 GHDCQ8N2G8 530 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 OR6F1Q8NGZ6 308 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 RNF128Q8TEB7 428 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 ABHD3Q8WU67 409 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 ROBO4Q8WZ75 1007 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 PNPLA2Q96AD5 504 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 PELI1Q96FA3 418 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 OXGR1Q96P68 337 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 ZNF385AQ96PM9 386 aaKnown RBP6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 KCNK17Q96T54 332 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 ALG12Q9BV10 488 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 PRDM14Q9GZV8 571 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 C11orf54Q9H0W9 315 aaPredicted RBP6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 SLITRK2Q9H156 845 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 ZNF71Q9NQZ8 489 aaPredicted RBP6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 VSX1Q9NZR4 365 aaPredicted RBP6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 EXTL2Q9UBQ6 330 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 ZNF281Q9Y2X9 895 aa6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 SIRT4Q9Y6E7 314 aaPredicted RBP6.21□□□□□ -1.42
HMGCS2-204ENST00000544913 SHANK1Q9Y566 2161 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 IGKV3D-15A0A087WSY6 115 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 PRSS37A4D1T9 235 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 GJE1A6NN92 205 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 NPIPA5E9PKD4 350 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 AQP7O14520 342 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 CTDSPLO15194 276 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 PLA2G10O15496 165 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 CYTIPO60759 359 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 SERPINI2O75830 405 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 UBL3O95164 117 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 TFP02787 698 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 GYPBP06028 91 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 PGA4P0DJD7 388 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 PGA3P0DJD8 388 aa6.2□□□□□ -1.42
HMGCS2-204ENST00000544913 CTLA4P16410 223 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms