RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 UGT2A1Q9Y4X1 527 aa8.37□□□□□ -1.07
YBX3-215ENST00000544504 TRGV8A0A0C4DH27 118 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 TVP23AA6NH52 213 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 CCL21O00585 134 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 MSTNO14793 375 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 ZNHIT1O43257 154 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 SELENOFO60613 162 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 ZNF254O75437 659 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 TNFSF13O75888 250 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 SULT1C4O75897 302 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 TFP02787 698 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 MT-ND5P03915 603 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 KRT8P05787 483 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 HTR1AP08908 422 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 MRPL3P09001 348 aaKnown RBP8.36□□□□□ -1.07
YBX3-215ENST00000544504 SPARCP09486 303 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 SMIM18P0DKX4 95 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 JUNBP17275 347 aaPredicted RBP8.36□□□□□ -1.07
YBX3-215ENST00000544504 ALOX5APP20292 161 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 AGAP20933 346 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 C21orf33P30042 268 aaPredicted RBP8.36□□□□□ -1.07
YBX3-215ENST00000544504 RPL5P46777 297 aaKnown RBP8.36□□□□□ -1.07
YBX3-215ENST00000544504 ART1P52961 327 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 TAS2R43P59537 309 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 TLE4Q04727 773 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 EGR3Q06889 387 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 SCRN3Q0VDG4 424 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 PMPCAQ10713 525 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 FAPQ12884 760 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 AQP6Q13520 282 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 ETFDHQ16134 617 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 SLC36A2Q495M3 483 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 PHYHD1Q5SRE7 291 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 OR7E24Q6IFN5 339 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 ANKRD16Q6P6B7 361 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 DEGS2Q6QHC5 323 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 PLXDC2Q6UX71 529 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 ZNF813Q6ZN06 617 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 SEM1Q6ZVN7 128 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 KCTD8Q6ZWB6 473 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 ZNF367Q7RTV3 350 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 DPY19L4Q7Z388 723 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 WDFY1Q8IWB7 410 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 NANOGP1Q8N7R0 232 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 GJC3Q8NFK1 279 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 SNX33Q8WV41 574 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 ZNRF4Q8WWF5 429 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
YBX3-215ENST00000544504 RND1Q92730 232 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 RHNO1Q9BSD3 238 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 ALG8Q9BVK2 526 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 C1orf198Q9H425 327 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 NIPAL2Q9H841 368 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 ISYNA1Q9NPH2 558 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 ACOT13Q9NPJ3 140 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 BATF3Q9NR55 127 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 MRPL22Q9NWU5 206 aaKnown RBP8.36□□□□□ -1.07
YBX3-215ENST00000544504 GALNT8Q9NY28 637 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 TAS2R16Q9NYV7 291 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 TINAGQ9UJW2 476 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 MEMO1Q9Y316 297 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 DOCK7Q96N67 2140 aa8.36□□□□□ -1.07
YBX3-215ENST00000544504 ARHGAP21Q5T5U3 1957 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 ALPK2Q86TB3 2170 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 MED12LQ86YW9 2145 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 PKDREJQ9NTG1 2253 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 IGKV1D-43A0A0B4J1Z2 117 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 A0A1W2PQL4 384 aaPredicted RBP8.35□□□□□ -1.07
YBX3-215ENST00000544504 APOL3O95236 402 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 IGHV3-9P01782 118 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 APOC1P02654 83 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 LIMS3P0CW19 117 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 LIMS4P0CW20 117 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 HOXC12P31275 282 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 ETV1P50549 477 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 GBX2P52951 348 aaPredicted RBP8.35□□□□□ -1.07
YBX3-215ENST00000544504 WNT4P56705 351 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 ARF1P84077 181 aaKnown RBP8.35□□□□□ -1.07
YBX3-215ENST00000544504 BDH1Q02338 343 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 ROM1Q03395 351 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 EMX1Q04741 257 aaPredicted RBP8.35□□□□□ -1.07
YBX3-215ENST00000544504 ECH1Q13011 328 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 BLMHQ13867 455 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 EIF2B1Q14232 305 aaKnown RBP8.35□□□□□ -1.07
YBX3-215ENST00000544504 SPHARQ15513 63 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 CDONQ4KMG0 1287 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 UBE2UQ5VVX9 321 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 KLHL24Q6TFL4 600 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 ZNF322Q6U7Q0 402 aaPredicted RBP8.35□□□□□ -1.07
YBX3-215ENST00000544504 B3GLCTQ6Y288 498 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 SSX8Q7RTT4 187 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 SLC16A14Q7RTX9 510 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 BTLAQ7Z6A9 289 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 LHFPL3Q86UP9 236 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.35□□□□□ -1.07
YBX3-215ENST00000544504 C17orf78Q8N4C9 275 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 SLC22A24Q8N4F4 322 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 OR52N5Q8NH56 324 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 THEM6Q8WUY1 208 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 ASB5Q8WWX0 329 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms