RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 MT-CO2P00403 227 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 LTBQ06643 244 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 OR8G1Q15617 311 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 Q499Y3 187 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 RBMS3Q6XE24 437 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 MAVSQ7Z434 540 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 OR5AS1Q8N127 324 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 GDPD1Q8N9F7 314 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 SCCPDHQ8NBX0 429 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 FAM71CQ8NEG0 241 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 C1orf162Q8NEQ5 155 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 RNF170Q96K19 258 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 OXGR1Q96P68 337 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 RTL8AQ9BWD3 113 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 BARHL1Q9BZE3 327 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 OR51E2Q9H255 320 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 SPNS1Q9H2V7 528 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 MRPS28Q9Y2Q9 187 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 B9A039 149 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 TNFSF11O14788 317 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 BET1O15155 118 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 CTSVO60911 334 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ADAM23O75077 832 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 MMP11P24347 488 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 AGTR1P30556 359 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 TAGLN2P37802 199 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 UCNP55089 124 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 CYCSP99999 105 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 TEKQ02763 1124 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 HES1Q14469 280 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 EDDM3AQ14507 147 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 STPG1Q5TH74 334 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 PMS2CLQ68D20 193 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 FCRL6Q6DN72 434 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 PWWP2BQ6NUJ5 590 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 CNIH2Q6PI25 160 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 LSRQ86X29 649 aaPredicted RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 RBM45Q8IUH3 476 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF683Q8IZ20 524 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 GGHQ92820 318 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 GPR87Q9BY21 358 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 SELENOIQ9C0D9 397 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 NOX4Q9NPH5 578 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF355PQ9NSJ1 428 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 SSUH2Q9Y2M2 353 aa6.28□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF831Q5JPB2 1677 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 CDHR4A6H8M9 788 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 MEIS3P1A6NDR6 274 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 SMLR1H3BR10 107 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 SOCS6O14544 535 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 AKAIN1P0CW23 69 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 GM2AP17900 193 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 HTR1FP30939 366 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 PTGER4P35408 488 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 EIF2S3P41091 472 aaKnown RBP6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 DAPP51397 102 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 AGFG1P52594 562 aaKnown RBP6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 THEM4Q5T1C6 240 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 FOXB2Q5VYV0 432 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 RHBDD2Q6NTF9 364 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 HAGHLQ6PII5 290 aaPredicted RBP6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 SLC24A4Q8NFF2 622 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 GHSRQ92847 366 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 PIGTQ969N2 578 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 INTS12Q96CB8 462 aaKnown RBP6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF764Q96H86 408 aaPredicted RBP6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 CCDC32Q9BV29 185 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 OR52A1Q9UKL2 312 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 RNF212BA8MTL3 300 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 M0R233 179 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 HS3ST1O14792 307 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 RGS11O94810 467 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 TOXO94900 526 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 RAB40ALP0C0E4 278 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 APEHP13798 732 aaKnown RBP6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 ADH6P28332 368 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 HTR2CP28335 458 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF92Q03936 586 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 FOXF1Q12946 379 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 IL24Q13007 206 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 MSMO1Q15800 293 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 SMN1Q16637 294 aaKnown RBP6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 HYAL4Q2M3T9 481 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF628Q5EBL2 1059 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 WIPI1Q5MNZ9 446 aaPredicted RBP6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 CREB3L2Q70SY1 520 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 B3GNT8Q7Z7M8 397 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 TMEM200AQ86VY9 491 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 ARIH2OSQ8N7S6 290 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 SEMA6DQ8NFY4 1073 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 RNF128Q8TEB7 428 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 RAB40AQ8WXH6 277 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 COX14Q96I36 57 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 LOXL4Q96JB6 756 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 OCSTAMPQ9BR26 566 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 BCL2L10Q9HD36 194 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 EHFQ9NZC4 300 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 GMPR2Q9P2T1 348 aaKnown RBP6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 NLKQ9UBE8 527 aa6.27□□□□□ -1.41
SRGAP1-206ENST00000543397 PIGLQ9Y2B2 252 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms