RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 SPATA4Q8NEY3 305 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 B3GNT7Q8NFL0 401 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 C15orf40Q8WUR7 153 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 PIBF1Q8WXW3 757 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 FBXO32Q969P5 355 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 TUBGCP3Q96CW5 907 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 RNF5Q99942 180 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 PARP12Q9H0J9 701 aaKnown RBP1.2□□□□□ -2.22
KNTC1-213ENST00000542727 SAV1Q9H4B6 383 aaPredicted RBP1.2□□□□□ -2.22
KNTC1-213ENST00000542727 EDA2RQ9HAV5 297 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 SLC38A10Q9HBR0 1119 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 FGF20Q9NP95 211 aaPredicted RBP1.2□□□□□ -2.22
KNTC1-213ENST00000542727 TMEM9BQ9NQ34 198 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 SLC2A8Q9NY64 477 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 HYOU1Q9Y4L1 999 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 TSSC4Q9Y5U2 329 aaPredicted RBP1.2□□□□□ -2.22
KNTC1-213ENST00000542727 WIF1Q9Y5W5 379 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 ADAMTS13Q76LX8 1427 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 MAPK8IP3Q9UPT6 1336 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 FAM240BA0A1B0GVZ2 78 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 LRRIQ3A6PVS8 624 aaPredicted RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 UBXN8O00124 270 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 MRPS12O15235 138 aaKnown RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 NUPL2O15504 423 aaKnown RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF207O43670 478 aaKnown RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 GCM2O75603 506 aaPredicted RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 YIF1AO95070 293 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 CCNE2O96020 404 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 CST1P01037 141 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 HLA-DQB1P01920 261 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 SERPINA5P05154 406 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 CRYGBP07316 175 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 CD3GP09693 182 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 C1GALT1C1LP0DN25 315 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 RNASE2P10153 161 aaKnown RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF24P17028 368 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 WARSP23381 471 aaKnown RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 F2RP25116 425 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 TAGLN2P37802 199 aaKnown RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 CSNK1EP49674 416 aaKnown RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 TMED10P49755 219 aaKnown RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 RPL23AP62750 156 aaKnown RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 TGM3Q08188 693 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF816Q0VGE8 651 aaPredicted RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF266Q14584 549 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 IRF4Q15306 451 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 SOHLH1Q5JUK2 328 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 DNLZQ5SXM8 178 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 SNX20Q7Z614 316 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 WDFY1Q8IWB7 410 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 NECAB1Q8N987 351 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 LILRB4Q8NHJ6 448 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 LINC01560Q8TB33 94 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 SHC3Q92529 594 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 KIFAP3Q92845 792 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 EEF1AKMT3Q96AZ1 226 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 ECHDC3Q96DC8 303 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF488Q96MN9 340 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 SLC29A1Q99808 456 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 CENPKQ9BS16 269 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 OSBPL11Q9BXB4 747 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 ETNK2Q9NVF9 386 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 PSMC3IPQ9P2W1 217 aaPredicted RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 PISDQ9UG56 409 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 ENOPH1Q9UHY7 261 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 STARD10Q9Y365 291 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 CSDC2Q9Y534 153 aaKnown RBP1.19□□□□□ -2.22
KNTC1-213ENST00000542727 KIAA1671Q9BY89 1806 aa1.19□□□□□ -2.22
KNTC1-213ENST00000542727 SHROOM3Q8TF72 1996 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 PTPRTO14522 1441 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 SVILO95425 2214 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 TRAV19A0A0A6YYK7 116 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 GLYATL1P3A0A0U1RQE8 302 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 RAB29O14966 203 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 LSM1O15116 133 aaKnown RBP1.18□□□□□ -2.22
KNTC1-213ENST00000542727 POLR1CO15160 346 aaPredicted RBP1.18□□□□□ -2.22
KNTC1-213ENST00000542727 CLPXO76031 633 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 CDRT1O95170 752 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 ACSM4P0C7M7 580 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 OR8U9P0C7N5 309 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF688P0C7X2 276 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 GGT1P19440 569 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 DCKP27707 260 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 NAA10P41227 235 aaPredicted RBP1.18□□□□□ -2.22
KNTC1-213ENST00000542727 NSG1P42857 185 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 CXCL12P48061 93 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 HCAR3P49019 387 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 P2RX1P51575 399 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 PPP1R7Q15435 360 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 MPV17L2Q567V2 206 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 PPM1LQ5SGD2 360 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 GPR107Q5VW38 600 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 SASS6Q6UVJ0 657 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 TMEM107Q6UX40 140 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 C12orf54Q6X4T0 127 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 CALHM3Q86XJ0 350 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 TMEM256Q8N2U0 113 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 LRRC52Q8N7C0 313 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 PRELID2Q8N945 189 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 FBXL13Q8NEE6 735 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms