RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 DEDD2Q8WXF8 326 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ACOT11Q8WXI4 607 aaPredicted RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 ANKRD9Q96BM1 317 aaPredicted RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 HPDLQ96IR7 371 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 BTN2A3PQ96KV6 586 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 C4orf36Q96KX1 117 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 CAPNS2Q96L46 248 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 HSFY1Q96LI6 401 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 HYLS1Q96M11 299 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 HSD17B14Q9BPX1 270 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 C11orf70Q9BRQ4 267 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 GGACTQ9BVM4 153 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 OSBPL11Q9BXB4 747 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 UCK2Q9BZX2 261 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ILKAPQ9H0C8 392 aaPredicted RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 CXXC4Q9H2H0 198 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 RGCCQ9H4X1 137 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 NANOGQ9H9S0 305 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 WDR41Q9HAD4 459 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 CXorf21Q9HAI6 301 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 NMNAT1Q9HAN9 279 aaPredicted RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 LPAR2Q9HBW0 351 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SLC25A19Q9HC21 320 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ZFP14Q9HCL3 533 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 DYRK4Q9NR20 520 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 POLE4Q9NR33 117 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 CHRAC1Q9NRG0 131 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 PNO1Q9NRX1 252 aaKnown RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 STARD5Q9NSY2 213 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 MRPL22Q9NWU5 206 aaKnown RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 LYARQ9NX58 379 aaKnown RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 MED11Q9P086 117 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 TMEM216Q9P0N5 145 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 METTL1Q9UBP6 276 aaKnown RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 KLK11Q9UBX7 282 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 PISDQ9UG56 409 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 CHRNA9Q9UGM1 479 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SMPXQ9UHP9 88 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 FZR1Q9UM11 496 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SSR3Q9UNL2 185 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 MOKQ9UQ07 419 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 MRPS18CQ9Y3D5 142 aaKnown RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 OR10H1Q9Y4A9 318 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 TSPOAP1O95153 1857 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ATP7AQ04656 1500 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 HMGXB3Q12766 1538 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 MYH6P13533 1939 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SPEF2Q9C093 1822 aa2.65□□□□□ -1.98
USP28-210ENST00000542033 GPATCH8Q9UKJ3 1502 aaKnown RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 IGHV3OR16-10A0A075B7F0 116 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 PNMA8CA0A1B0GUJ8 204 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 A0A1B0GV72 72 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 A0A1B0GW55 424 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 OR5H15A6NDH6 313 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 METTL21EPA6NDL7 271 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 SERPINE3A8MV23 424 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ARHGEF33A8MVX0 844 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 A8MXK9 166 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 SUPT3HB4E1H0 165 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 MKRN2OSH3BPM6 223 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 J3QRK9 145 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DNASE2O00115 360 aaPredicted RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 PDHXO00330 501 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 BHLHE40O14503 412 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 INPP4BO15327 924 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 TNFSF12O43508 249 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 HCN1O60741 890 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 MRPS14O60783 128 aaKnown RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 ZMPSTE24O75844 475 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 SCO1O75880 301 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 IFNA17P01571 189 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 GYPCP04921 128 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DUX4L2P0CJ85 424 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DUX4L3P0CJ86 424 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DUX4L4P0CJ87 422 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DUX4L5P0CJ88 424 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DUX4L6P0CJ89 424 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DUX4L7P0CJ90 424 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 MUC1P15941 1255 aaPredicted RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 NQO2P16083 231 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 SRMP19623 302 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 CNR1P21554 472 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 ME2P23368 584 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 EDNRAP25101 427 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 HLA-DMAP28067 261 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 GTF2E2P29084 291 aaKnown RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 CASP1P29466 404 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 S100A11P31949 105 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 FOXN2P32314 431 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 DLSTP36957 453 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 MAGEA3P43357 314 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 KCNJ3P48549 501 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 KPNA2P52292 529 aaKnown RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 CRYBA2P53672 197 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 UBE2G2P60604 165 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 RAB5BP61020 215 aa2.65□□□□□ -1.99
USP28-210ENST00000542033 RPL27P61353 136 aaKnown RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 DYNLL1P63167 89 aaKnown RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 TFAMQ00059 246 aaKnown RBP2.65□□□□□ -1.99
USP28-210ENST00000542033 GTF2BQ00403 316 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms