RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 FTH1P19P0C7X4 201 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 PTH2RP49190 550 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 CTXN1P60606 82 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 RPS11P62280 158 aaKnown RBP eCLIP12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 SRSF6Q13247 344 aaKnown RBP12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 TGIF1Q15583 401 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 RPL22L1Q6P5R6 122 aaKnown RBP12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 HIST3H2AQ7L7L0 130 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 FAM220AQ7Z4H9 259 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 THAP6Q8TBB0 222 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 SMIM4Q8WVI0 70 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 HIST1H2ACQ93077 130 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 ANKRD9Q96BM1 317 aaPredicted RBP12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 C7orf50Q9BRJ6 194 aaKnown RBP12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 EPHA6Q9UF33 1036 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 V9GY05 133 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 IFITM5A6NNB3 132 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 C17orf51A8MQB3 221 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 ZNF705EA8MWA4 302 aaPredicted RBP12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 TXNL1O43396 289 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 ZNF254O75437 659 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 SCRG1O75711 98 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 SLC34A2O95436 690 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 CDK2P24941 298 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 POU4F2Q12837 409 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 SQSTM1Q13501 440 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 PRTGQ2VWP7 1150 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 MUC20Q8N307 709 aaPredicted RBP12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 OR10AC1Q8NH08 325 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 UCK1Q9HA47 277 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 Q9N2J8 555 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 KLHL9Q9P2J3 617 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 NPTNQ9Y639 398 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 SSX5O60225 188 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 FARS2O95363 451 aaKnown RBP12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 ITPKBP27987 946 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 ART1P52961 327 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 TAF13Q15543 124 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 UBE2NLQ5JXB2 153 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 LIPNQ5VXI9 398 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 LRRTM1Q86UE6 522 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 ZNF563Q8TA94 476 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 C8orf44Q96CB5 159 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 SLC25A36Q96CQ1 311 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 GAL3ST4Q96RP7 486 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 STACQ99469 402 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 FOXJ2Q9P0K8 574 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 CHRNA9Q9UGM1 479 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 OPN4Q9UHM6 478 aa12.9□□□□□ -0.34
SFSWAP-210ENST00000541286 OR2T1O43869 369 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 SC5DO75845 299 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 ACP1P24666 158 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 CDKN2AP42771 156 aaKnown RBP12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 GUCA2AQ02747 115 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 MGAT2Q10469 447 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 IKZF1Q13422 519 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 LRRC69Q6ZNQ3 347 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 LANCL3Q6ZV70 420 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 SLC35D2Q76EJ3 337 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 DPY19L4Q7Z388 723 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 OR1S2Q8NGQ3 325 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 JAM3Q9BX67 310 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 SLITRK2Q9H156 845 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 NBASA2RRP1 2371 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 LY86O95711 162 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 ECDO95905 644 aaPredicted RBP12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 ACAA1P09110 424 aaPredicted RBP12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 SMIM10L1P0DMW3 83 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 RPS4Y1P22090 263 aaKnown RBP12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 DIO1P49895 249 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 ARFIP1P53367 373 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 RAP2BP61225 183 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 CBLN3Q6UW01 205 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 C12orf45Q8N5I9 185 aaPredicted RBP12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 ZNF321PQ8N8H1 164 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 OR51A4Q8NGJ6 313 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 SMIM10Q96HG1 83 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 MOGAT1Q96PD6 335 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 PTDSS2Q9BVG9 487 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 KLHDC2Q9Y2U9 406 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 ZNF281Q9Y2X9 895 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 RTTNQ86VV8 2226 aa12.89□□□□□ -0.35
SFSWAP-210ENST00000541286 OR6C76A6NM76 312 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 DCTN6O00399 190 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 IFNGR1P15260 489 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 BLOC1S1P78537 153 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 OR7A5Q15622 319 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 HSD17B13Q7Z5P4 300 aaPredicted RBP12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 ZNF546Q86UE3 836 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 NPEPL1Q8NDH3 523 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 SLC25A38Q96DW6 304 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 DGAT2Q96PD7 388 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 TRAV1-2A0A0B4J238 106 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 F5H5P2 479 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 PRAMEF2O60811 474 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 ITGA10O75578 1167 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 TGM6O95932 706 aa12.88□□□□□ -0.35
SFSWAP-210ENST00000541286 GIPP09681 153 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms