RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 OR2T1O43869 369 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 ATG12O94817 140 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR6A2O95222 327 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 LDOC1O95751 146 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 ACTL6AO96019 429 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 HTR2CP28335 458 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 CALCRP30988 508 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 EFNA3P52797 238 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 PPIAP62937 165 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZP2Q05996 745 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 PMPCAQ10713 525 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 EIF2B5Q13144 721 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 TMEM92Q6UXU6 159 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 SHISA6Q6ZSJ9 500 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZNF615Q8N8J6 731 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 HOXB13Q92826 284 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 SLC41A2Q96JW4 573 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 FOXQ1Q9C009 403 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 SELENOIQ9C0D9 397 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 CRISPLD2Q9H0B8 497 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 POLE3Q9NRF9 147 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 FAM96BQ9Y3D0 163 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 LRP12Q9Y561 859 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 A0A0B4J2A0 478 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 KANTRA0A1W2PQU2 76 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 P2RY10O00398 339 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 ABCD4O14678 606 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 CYB5AP00167 134 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 RENP00797 406 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 GNB3P16520 340 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 CNR1P21554 472 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 SLC25A1P53007 311 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 HHEXQ03014 270 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 BIKQ13323 160 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 MANEAQ5SRI9 462 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 TMEM71Q6P5X7 295 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 LINC00518Q8N0U6 118 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 METTL21AQ8WXB1 218 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 GPX7Q96SL4 187 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 SOX7Q9BT81 388 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 G6PC3Q9BUM1 346 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 ABHD6Q9BV23 337 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 FN3KRPQ9HA64 309 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 MED9Q9NWA0 146 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 EPHA6Q9UF33 1036 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 SHPKQ9UHJ6 478 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 COA3Q9Y2R0 106 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 IGKV1D-43A0A0B4J1Z2 117 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR2AT4A6NND4 320 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 SHISA8B8ZZ34 492 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 DISC1C4P0D8 188 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 RNH1P13489 461 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 GFERP55789 205 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 CDCP2Q5VXM1 449 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 GLT8D1Q68CQ7 371 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 PTCRAQ6ISU1 281 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 LDLRAD3Q86YD5 345 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR5M8Q8NGP6 311 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZBTB8AQ96BR9 441 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR8B4Q96RC9 309 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 TSNAXQ99598 290 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 CFHR5Q9BXR6 569 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 DUSP15Q9H1R2 295 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 PTGES2Q9H7Z7 377 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 CENPMQ9NSP4 180 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 TNFSF18Q9UNG2 199 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 TMEM200CA6NKL6 621 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 SCDO00767 359 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 XKRYO14609 159 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZNF264O43296 627 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 PMP2P02689 132 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 PGAM2P15259 253 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 MGMTP16455 207 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 NFYBP25208 207 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 C1orf53Q5VUE5 145 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 RAB12Q6IQ22 244 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 C11orf87Q6NUJ2 197 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 FJX1Q86VR8 437 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 ARHGEF39Q8N4T4 335 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR13C3Q8NGS6 347 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 TMED6Q8WW62 240 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 PCOLCE2Q9UKZ9 415 aa9.3□□□□□ -0.92
CDC42SE1-207ENST00000540998 THADAQ6YHU6 1953 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 SDK2Q58EX2 2172 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 AQP8O94778 261 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 GP1BAP07359 652 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 HRH1P35367 487 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 CD96P40200 585 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 CASRP41180 1078 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 AKR1C3P42330 323 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 PSMD4P55036 377 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 TAS2R19P59542 299 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 RSPO4Q2I0M5 234 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 PAPD4Q6PIY7 484 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 ETV3LQ6ZN32 361 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 TRAPPC6BQ86SZ2 158 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 ELP5Q8TE02 316 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 ASB12Q8WXK4 309 aa9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 RRNAD1Q96FB5 475 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-207ENST00000540998 NICN1Q9BSH3 213 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms