RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 FBXO6Q9NRD1 293 aaPredicted RBP1.57□□□□□ -2.16
MDM2-227ENST00000540709 SUN2Q9UH99 717 aa1.57□□□□□ -2.16
MDM2-227ENST00000540709 BLOC1S6Q9UL45 172 aa1.57□□□□□ -2.16
MDM2-227ENST00000540709 KCNE3Q9Y6H6 103 aa1.57□□□□□ -2.16
MDM2-227ENST00000540709 AHDC1Q5TGY3 1603 aaPredicted RBP1.56□□□□□ -2.16
MDM2-227ENST00000540709 TRAV19A0A0A6YYK7 116 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 SPECC1L-ADORA2AF8WAN1 911 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 CLIC3O95833 236 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 ZNF806P0C7X5 589 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 ZNF735P0CB33 412 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 TGFBR1P36897 503 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 TNFSF9P41273 254 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 HCAR3P49019 387 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 P2RX1P51575 399 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 ADARB1P78563 741 aaKnown RBP1.56□□□□□ -2.16
MDM2-227ENST00000540709 MXD1Q05195 221 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 TCEAL5Q5H9L2 206 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 AVPI1Q5T686 147 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 SPECC1LQ69YQ0 1117 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 NBPF5PQ86XG9 351 aaPredicted RBP1.56□□□□□ -2.16
MDM2-227ENST00000540709 CDKL3Q8IVW4 592 aaPredicted RBP1.56□□□□□ -2.16
MDM2-227ENST00000540709 WDFY1Q8IWB7 410 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 APCDD1LQ8NCL9 501 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 C17orf50Q8WW18 174 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 SHC3Q92529 594 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 TCEAL3Q969E4 200 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 PTX4Q96A99 478 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 TRIM44Q96DX7 344 aaPredicted RBP1.56□□□□□ -2.16
MDM2-227ENST00000540709 DNAJC1Q96KC8 554 aaKnown RBP1.56□□□□□ -2.16
MDM2-227ENST00000540709 PKNOX2Q96KN3 472 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 HSD17B10Q99714 261 aaKnown RBP1.56□□□□□ -2.16
MDM2-227ENST00000540709 ROPN1BQ9BZX4 212 aaPredicted RBP1.56□□□□□ -2.16
MDM2-227ENST00000540709 CWH43Q9H720 699 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 KLHL28Q9NXS3 571 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 SLC7A8Q9UHI5 535 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 CNTNAP1P78357 1384 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 TNS2Q63HR2 1409 aa1.56□□□□□ -2.16
MDM2-227ENST00000540709 GLYATL1P3A0A0U1RQE8 302 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 SOCS1O15524 211 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 CD3GP09693 182 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 TNNI1P19237 187 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 BST2Q10589 180 aaKnown RBP1.55□□□□□ -2.16
MDM2-227ENST00000540709 VPS26BQ4G0F5 336 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 SPINT4Q6UDR6 99 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 SLC16A13Q7RTY0 426 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 TMEM256Q8N2U0 113 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 EIF1ADQ8N9N8 165 aaKnown RBP1.55□□□□□ -2.16
MDM2-227ENST00000540709 SDR9C7Q8NEX9 313 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 OR1S2Q8NGQ3 325 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 OR2A1Q8NGT9 310 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 PLPPR1Q8TBJ4 325 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 ZNF502Q8TBZ5 544 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 CCDC126Q96EE4 140 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 ZNF488Q96MN9 340 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 ZBTB18Q99592 522 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 RSG1Q9BU20 258 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 TEKT3Q9BXF9 490 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 OR52D1Q9H346 318 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 EXOSC4Q9NPD3 245 aaKnown RBP1.55□□□□□ -2.16
MDM2-227ENST00000540709 CTNNA3Q9UI47 895 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 ZNF391Q9UJN7 358 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 ST3GAL6Q9Y274 331 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 SIGLEC9Q9Y336 463 aa1.55□□□□□ -2.16
MDM2-227ENST00000540709 SHANK1Q9Y566 2161 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 OTOGLQ3ZCN5 2332 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 ZNF716A6NP11 495 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 LGALS9O00182 355 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 CHMP2AO43633 222 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 SLC22A5O76082 557 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 HLA-DQB1P01920 261 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 PABPC4LP0CB38 370 aaKnown RBP1.54□□□□□ -2.16
MDM2-227ENST00000540709 ZNF250P15622 560 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 HNMTP50135 292 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 TPMTP51580 245 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 CCNHP51946 323 aaPredicted RBP1.54□□□□□ -2.16
MDM2-227ENST00000540709 PLP1P60201 277 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 CRADDP78560 199 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 BAMBIQ13145 260 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 MPV17L2Q567V2 206 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 TMEM205Q6UW68 189 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 UBE2J2Q8N2K1 259 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 ZCCHC7Q8N3Z6 543 aaKnown RBP1.54□□□□□ -2.16
MDM2-227ENST00000540709 MS4A15Q8N5U1 240 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 ST20-AS1Q8NBB2 130 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 TMEM104Q8NE00 496 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 B3GNT7Q8NFL0 401 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 SLC7A13Q8TCU3 470 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 ILKAPQ9H0C8 392 aaPredicted RBP1.54□□□□□ -2.16
MDM2-227ENST00000540709 VANGL2Q9ULK5 521 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 CBY1Q9Y3M2 126 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 NID2Q14112 1375 aa1.54□□□□□ -2.16
MDM2-227ENST00000540709 ZNF98A6NK75 572 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 C16orf90A8MZG2 172 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 H0YJW9 148 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 POLR1CO15160 346 aaPredicted RBP1.53□□□□□ -2.16
MDM2-227ENST00000540709 RDH16O75452 317 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 REM1O75628 298 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 SEMA3DO95025 777 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 OR8U9P0C7N5 309 aa1.53□□□□□ -2.16
MDM2-227ENST00000540709 P0C880 135 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms