RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 IL3P08700 152 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 FGF5P12034 268 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 BCKDHBP21953 392 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 CDK2P24941 298 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 APOBEC3AP31941 199 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-214ENST00000540539 SLC6A9P48067 706 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 SULT1A2P50226 295 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 UCP3P55916 312 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 PCBP3P57721 371 aaKnown RBP8.56□□□□□ -1.04
CLIP1-214ENST00000540539 PPP2CBP62714 309 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 PPP2CAP67775 309 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 RPL19P84098 196 aaKnown RBP8.56□□□□□ -1.04
CLIP1-214ENST00000540539 SLC10A7Q0GE19 358 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 SLC9A3R2Q15599 337 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 CLLU1OSQ5K130 101 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 AADACL3Q5VUY0 350 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 NOXRED1Q6NXP6 359 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 GLB1LQ6UWU2 654 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 UNQ9370/PRO34162Q6UXP9 181 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.56□□□□□ -1.04
CLIP1-214ENST00000540539 SLC35D2Q76EJ3 337 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 ERN2Q76MJ5 926 aaKnown RBP8.56□□□□□ -1.04
CLIP1-214ENST00000540539 FCRLAQ7L513 359 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 CPOQ8IVL8 374 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 ZSCAN4Q8NAM6 433 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-214ENST00000540539 PGLYRP3Q96LB9 341 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 CAPN10Q9HC96 672 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 CUTCQ9NTM9 273 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 CLEC5AQ9NY25 188 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 PLA2G2EQ9NZK7 142 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 APOBEC3BQ9UH17 382 aaKnown RBP8.56□□□□□ -1.04
CLIP1-214ENST00000540539 GTF2A1LQ9UNN4 478 aa8.56□□□□□ -1.04
CLIP1-214ENST00000540539 MSGN1A6NI15 193 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 A8MVM7 634 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 INSIG1O15503 277 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 GPANK1O95872 356 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 HPRT1P00492 218 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 ITGB2P05107 769 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 DPP4P27487 766 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 EFNA3P52797 238 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 TAS2R20P59543 309 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 UBE2V1Q13404 147 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 CRMP1Q14194 572 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 LYPLAL1Q5VWZ2 237 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 CD300LDQ6UXZ3 194 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 RPTNQ6XPR3 784 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 GRASPQ7Z6J2 395 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-214ENST00000540539 MRGPREQ86SM8 312 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 C17orf64Q86WR6 236 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 RBM45Q8IUH3 476 aaKnown RBP8.55□□□□□ -1.04
CLIP1-214ENST00000540539 OR51G2Q8NGK0 314 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 OR5D18Q8NGL1 313 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 LYPD6BQ8NI32 183 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 ORAOV1Q8WV07 137 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 C16orf58Q96GQ5 468 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 STACQ99469 402 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 PCGF1Q9BSM1 259 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 SLC25A51Q9H1U9 297 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 NELFAQ9H3P2 528 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 KCNJ16Q9NPI9 418 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 ANKRD10Q9NXR5 420 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 SRPK3Q9UPE1 567 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 SLC38A8A6NNN8 435 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 J3QRE1 110 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 GAPDHSO14556 408 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-214ENST00000540539 NDUFS3O75489 264 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 CH25HO95992 272 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 PIRTP0C851 137 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 AMD1P17707 334 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 SERPINA2P20848 420 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 SNCAP37840 140 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 POLR2HP52434 150 aaKnown RBP8.55□□□□□ -1.04
CLIP1-214ENST00000540539 UBE2KP61086 200 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 EIF4EBP2Q13542 120 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-214ENST00000540539 CLEC12AQ5QGZ9 265 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 C10orf120Q5SQS8 335 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 CD300LGQ6UXG3 332 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 DNM1P46Q6ZS02 220 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 MTSS1LQ765P7 747 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 C1orf87Q8N0U7 546 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 CRIPAKQ8N1N5 446 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 LMNTD1Q8N9Z9 388 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 OR14C36Q8NHC7 312 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 FAM174AQ8TBP5 190 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 ZNF587Q96SQ5 575 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-214ENST00000540539 SLC17A9Q9BYT1 436 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 EIF5A2Q9GZV4 153 aaKnown RBP8.55□□□□□ -1.04
CLIP1-214ENST00000540539 GOLGA2P5Q9HBQ8 144 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 Q9N2J8 555 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 MTFP1Q9UDX5 166 aa8.55□□□□□ -1.04
CLIP1-214ENST00000540539 RBM7Q9Y580 266 aaKnown RBP8.55□□□□□ -1.04
CLIP1-214ENST00000540539 NYNRINQ9P2P1 1898 aaKnown RBP8.55□□□□□ -1.04
CLIP1-214ENST00000540539 GJB3O75712 270 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 CSTAP01040 98 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 SLC35G6P0C7Q6 338 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 OR13C7P0DN81 318 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 CDKN1CP49918 316 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-214ENST00000540539 NHLH1Q02575 133 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 SHHQ15465 462 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 TMEM268Q5VZI3 342 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms