RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 ADAM18Q9Y3Q7 739 aa7.59□□□□□ -1.19
TRAPPC1-202ENST00000540486 U3KQV3 271 aa7.59□□□□□ -1.19
TRAPPC1-202ENST00000540486 TENM3Q9P273 2699 aa7.59□□□□□ -1.19
TRAPPC1-202ENST00000540486 ARPC4-TTLL3A0A0A6YYG9 625 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 TRAV20A0A0B4J274 112 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 CENPBD1B2RD01 187 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 B9A039 149 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 M0R1B8 84 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 TIMM23O14925 209 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 NDUFB2O95178 105 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 SLC2A10O95528 541 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 CST1P01037 141 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 IGHG1P01857 330 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 ERCC1P07992 297 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 CD14P08571 375 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 DAOP14920 347 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 CBR1P16152 277 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 FPR3P25089 353 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 DAP3P51398 398 aaKnown RBP7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 IDH3GP51553 393 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 SH3BGRP55822 239 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 CLRN1P58418 232 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 FMODQ06828 376 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 TSPAN31Q12999 210 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 TOP3AQ13472 1001 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 CCNIQ14094 377 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 TAF11Q15544 211 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 RFX4Q33E94 735 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 C1QTNF12Q5T7M4 302 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 Q6ZPA2 131 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 REC114Q7Z4M0 266 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 C1QL2Q7Z5L3 287 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 C1QL4Q86Z23 238 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 SKA3Q8IX90 412 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 OR51F2Q8NH61 342 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 NANPQ8TBE9 248 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 Q96M85 177 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 GPX7Q96SL4 187 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 FOXB1Q99853 325 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 KATNB1Q9BVA0 655 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 OR52D1Q9H346 318 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 REEP1Q9H902 201 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 SEC61A2Q9H9S3 476 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 LIN7BQ9HAP6 207 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 NOX3Q9HBY0 568 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 OBP2BQ9NPH6 170 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 B3GAT2Q9NPZ5 323 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 TMEM38BQ9NVV0 291 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 CRNNQ9UBG3 495 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 SAMHD1Q9Y3Z3 626 aaKnown RBP7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 UGT2A1Q9Y4X1 527 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 PPIAL4AQ9Y536 164 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 IER3IP1Q9Y5U9 82 aa7.58□□□□□ -1.2
TRAPPC1-202ENST00000540486 HEATR1Q9H583 2144 aaKnown RBP7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 LOC105371242A0A075B767 164 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 IGHV1-18A0A0C4DH31 117 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 A0A1B0GUS0 222 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 EBAG9O00559 213 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 FKBP6O75344 327 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 CCNB2O95067 398 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 TXNDC12O95881 172 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 WNT11O96014 354 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 IGKV3-15P01624 115 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 IGLV1-44P01699 117 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 HLA-HP01893 362 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 TFP02787 698 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 SCG5P05408 212 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 IGFBP1P08833 259 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 CELA3BP08861 270 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 PATE4P0C8F1 98 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 B4GALT1P15291 398 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 PRKACGP22612 351 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 CDAP32320 146 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 RPL4P36578 427 aaKnown RBP7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 SERPINF1P36955 418 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 CDKN2AP42771 156 aaKnown RBP7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 PPOXP50336 477 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 UBE2NP61088 152 aaKnown RBP7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 PIGFQ07326 219 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 DBPQ10586 325 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 TRIP10Q15642 601 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 MESTQ5EB52 335 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 ZNF362Q5T0B9 420 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 C10orf128Q5T292 105 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 SMARCD3Q6STE5 483 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 KLHL24Q6TFL4 600 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 ZNF813Q6ZN06 617 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 DPY19L2P2Q6ZN68 376 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 CCDC121Q6ZUS5 278 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 PTCHD4Q6ZW05 846 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 MYPOPQ86VE0 399 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 SLC22A24Q8N4F4 322 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 FAM169BQ8N8A8 192 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 NOXO1Q8NFA2 376 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 UBE2FQ969M7 185 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 RASD2Q96D21 266 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 DUS3LQ96G46 650 aaKnown RBP7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 SAMD8Q96LT4 415 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 RBP7Q96R05 134 aa7.57□□□□□ -1.2
TRAPPC1-202ENST00000540486 DDOQ99489 341 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms