RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 NRBF2Q96F24 287 aa11.52□□□□□ -0.57
CCDC130-202ENST00000540216 FOXN4Q96NZ1 517 aa11.52□□□□□ -0.57
CCDC130-202ENST00000540216 TSSK2Q96PF2 358 aa11.52□□□□□ -0.57
CCDC130-202ENST00000540216 SORCS2Q96PQ0 1159 aa11.52□□□□□ -0.57
CCDC130-202ENST00000540216 VRK1Q99986 396 aaPredicted RBP11.52□□□□□ -0.57
CCDC130-202ENST00000540216 NIPSNAP1Q9BPW8 284 aa11.52□□□□□ -0.57
CCDC130-202ENST00000540216 MRPL37Q9BZE1 423 aaKnown RBP11.52□□□□□ -0.57
CCDC130-202ENST00000540216 MS4A5Q9H3V2 200 aa11.52□□□□□ -0.57
CCDC130-202ENST00000540216 ELOVL3Q9HB03 270 aa11.52□□□□□ -0.57
CCDC130-202ENST00000540216 ASH2LQ9UBL3 628 aa11.52□□□□□ -0.57
CCDC130-202ENST00000540216 GPR160Q9UJ42 338 aa11.52□□□□□ -0.57
CCDC130-202ENST00000540216 KCNG2Q9UJ96 466 aa11.52□□□□□ -0.57
CCDC130-202ENST00000540216 KLHL21Q9UJP4 597 aa11.52□□□□□ -0.57
CCDC130-202ENST00000540216 IGLV3-9A0A075B6K5 115 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 A0A1W2PPW3 197 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 RIIAD1A6NNX1 92 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 MPZL1O95297 269 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 IFNGP01579 166 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 TP53P04637 393 aaPredicted RBP11.51□□□□□ -0.57
CCDC130-202ENST00000540216 TUBG1P23258 451 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 GRK5P34947 590 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 ERFP50548 548 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 KLF3P57682 345 aaPredicted RBP11.51□□□□□ -0.57
CCDC130-202ENST00000540216 MOGQ16653 247 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 MSMPQ1L6U9 139 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 SHQ1Q6PI26 577 aaKnown RBP11.51□□□□□ -0.57
CCDC130-202ENST00000540216 ASRGL1Q7L266 308 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 VASH1Q7L8A9 365 aaPredicted RBP11.51□□□□□ -0.57
CCDC130-202ENST00000540216 TMEM179BQ7Z7N9 219 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 GJC3Q8NFK1 279 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 OR10H5Q8NGA6 315 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 SYNPRQ8TBG9 265 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 IPCEF1Q8WWN9 437 aaPredicted RBP11.51□□□□□ -0.57
CCDC130-202ENST00000540216 FAM168AQ92567 244 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 DUS3LQ96G46 650 aaKnown RBP11.51□□□□□ -0.57
CCDC130-202ENST00000540216 SYT3Q9BQG1 590 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 REG4Q9BYZ8 158 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 SRA1Q9HD15 236 aaKnown RBP11.51□□□□□ -0.57
CCDC130-202ENST00000540216 TUBG2Q9NRH3 451 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 ARMC1Q9NVT9 282 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 SLCO1C1Q9NYB5 712 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 PLEK2Q9NYT0 353 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 REV1Q9UBZ9 1251 aa11.51□□□□□ -0.57
CCDC130-202ENST00000540216 OR6C6A6NF89 314 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 H3BN98 237 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 J3QW42 95 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 NDUFS8O00217 210 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 FCGR1AP12314 374 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 SLC25A16P16260 332 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 ZNF3P17036 446 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 WNT5AP41221 380 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 HTR5AP47898 357 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 SLC25A1P53007 311 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 HIST1H3AP68431 136 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 TEKQ02763 1124 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 ATP6AP1Q15904 470 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 ZNF362Q5T0B9 420 aaPredicted RBP11.5□□□□□ -0.57
CCDC130-202ENST00000540216 HIST2H3PS2Q5TEC6 136 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 HIST2H3AQ71DI3 136 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 ZNF101Q8IZC7 436 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 CIARTQ8N365 385 aaPredicted RBP11.5□□□□□ -0.57
CCDC130-202ENST00000540216 ZNF525Q8N782 197 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 CYB561A3Q8NBI2 242 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 SLC37A3Q8NCC5 494 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 PROKR2Q8NFJ6 384 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 OR1J1Q8NGS3 322 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 OR4Q3Q8NH05 313 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 OR1F12Q8NHA8 337 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 UTP4Q969X6 686 aaKnown RBP11.5□□□□□ -0.57
CCDC130-202ENST00000540216 C4orf45Q96LM5 186 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 DDOQ99489 341 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 HDHD2Q9H0R4 259 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 OR51B6Q9H340 312 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 FN3KQ9H479 309 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 CMC2Q9NRP2 79 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 DUSP13Q9UII6 198 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 LHFPL6Q9Y693 200 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 RTTNQ86VV8 2226 aa11.5□□□□□ -0.57
CCDC130-202ENST00000540216 LOC390937A0A1W2PQ73 354 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 RNF223E7ERA6 249 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 EBAG9O00559 213 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 TIPRLO75663 272 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 ABHD16AO95870 558 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 IGHV3-13P01766 116 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 HLA-DQA2P01906 255 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 TFP02787 698 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 MT-ND5P03915 603 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 IGFBP1P08833 259 aaPredicted RBP11.49□□□□□ -0.57
CCDC130-202ENST00000540216 ADRA2AP08913 450 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 OSMP13725 252 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 FASP25445 335 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 GCH1P30793 250 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 PDLIM4P50479 330 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 BLVRAP53004 296 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 ERVS71-1P61550 626 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 PPP1CBP62140 327 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 CCNIQ14094 377 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 MEP1BQ16820 701 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 NKPD1Q17RQ9 610 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 ZNF718Q3SXZ3 478 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms