RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 EGR3Q06889 387 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 EIF2B1Q14232 305 aaKnown RBP12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 SLC17A1Q14916 467 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 H3F3CQ6NXT2 135 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 PAPD4Q6PIY7 484 aaKnown RBP12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 MED25Q71SY5 747 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 SVBPQ8N300 66 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 OR4A4PQ8NGN8 299 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 EDEM2Q9BV94 578 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 SCPEP1Q9HB40 452 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 SHPKQ9UHJ6 478 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 KCNK7Q9Y2U2 307 aa12.53□□□□□ -0.4
SCNN1A-215ENST00000540037 PLRG1O43660 514 aaKnown RBP12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 ZNF432O94892 652 aa12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 TIMP1P01033 207 aa12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 GLAP06280 429 aa12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 MELTFP08582 738 aa12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 PNLIPRP2P54317 469 aa12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 TOMM34Q15785 309 aaPredicted RBP12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 PRR22Q8IZ63 422 aa12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 THAP6Q8TBB0 222 aa12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 NUDCD2Q8WVJ2 157 aa12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 SLC25A36Q96CQ1 311 aa12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 SLC25A44Q96H78 314 aaPredicted RBP12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 OR8B4Q96RC9 309 aa12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 KXD1Q9BQD3 176 aa12.52□□□□□ -0.4
SCNN1A-215ENST00000540037 WDFY3Q8IZQ1 3526 aa12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 A6NCN8 305 aa12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 CELA2BP08218 269 aaPredicted RBP12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 MYOGP15173 224 aa12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 TACR3P29371 465 aa12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 KLHL26Q53HC5 615 aa12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 WBP2NLQ6ICG8 309 aa12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 TMEM200AQ86VY9 491 aa12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 GTPBP8Q8N3Z3 284 aaPredicted RBP12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 FAM160A2Q8N612 972 aaPredicted RBP12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 OR4D6Q8NGJ1 314 aa12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 RRNAD1Q96FB5 475 aaKnown RBP12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 TCEAL2Q9H3H9 227 aaPredicted RBP12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 IFT22Q9H7X7 185 aa12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 FN3KRPQ9HA64 309 aa12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 MRPL22Q9NWU5 206 aaKnown RBP12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 KIAA0100Q14667 2235 aaKnown RBP12.52□□□□□ -0.41
SCNN1A-215ENST00000540037 C9orf170A2RU37 121 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 RENP00797 406 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 ST6GAL1P15907 406 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 FCARP24071 287 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 ELOCQ15369 112 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 VWA2Q5GFL6 755 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 ZNF776Q68DI1 518 aaPredicted RBP12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 RAB11FIP2Q7L804 512 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 LYG2Q86SG7 212 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 INO80EQ8NBZ0 244 aaPredicted RBP12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 ELP5Q8TE02 316 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 G6PC3Q9BUM1 346 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 OR10A5Q9H207 317 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 SEMA6CQ9H3T2 930 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 CTSFQ9UBX1 484 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 CLDN16Q9Y5I7 305 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 CSAG2Q9Y5P2 127 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 SLC16A7O60669 478 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 CRYBA1P05813 215 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 ERCC1P07992 297 aaPredicted RBP12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 HPGDP15428 266 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 CD96P40200 585 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 GPR3P46089 330 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 ADAM8P78325 824 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 FJX1Q86VR8 437 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 ZNF584Q8IVC4 421 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 ZSCAN1Q8NBB4 408 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 AVL9Q8NBF6 648 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 OR10R2Q8NGX6 335 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 ZNF563Q8TA94 476 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 BMFQ96LC9 184 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 TREM1Q9NP99 234 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 PRMT8Q9NR22 394 aaPredicted RBP12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 C5orf51A6NDU8 294 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 ZNF208O43345 1280 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 SKP2Q13309 424 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 PAQR4Q8N4S7 273 aaPredicted RBP12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 ELSPBP1Q96BH3 223 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 PHYHIPLQ96FC7 376 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 SLC19A3Q9BZV2 496 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 SLC22A11Q9NSA0 550 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 CYB5R1Q9UHQ9 305 aa12.51□□□□□ -0.41
SCNN1A-215ENST00000540037 FARS2O95363 451 aaKnown RBP12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 TXNDC12O95881 172 aa12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 CD74P04233 296 aa12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 HRH1P35367 487 aa12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 TRAPPC6BQ86SZ2 158 aa12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 CCDC36Q8IYA8 594 aa12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 ZNF679Q8IYX0 411 aa12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 CHST4Q8NCG5 386 aa12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 RXFP4Q8TDU9 374 aa12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 DCUN1D4Q92564 292 aa12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 RSC1A1Q92681 617 aa12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 EDAQ92838 391 aa12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 PIK3IP1Q96FE7 263 aa12.5□□□□□ -0.41
SCNN1A-215ENST00000540037 EMC9Q9Y3B6 208 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms