RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 UBE2NP61088 152 aaKnown RBP5.56□□□□□ -1.52
SNHG1-211ENST00000539921 ZNF616Q08AN1 781 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 DHRS2Q13268 280 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 MRPL49Q13405 166 aaKnown RBP5.56□□□□□ -1.52
SNHG1-211ENST00000539921 MADCAM1Q13477 382 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 NSDHLQ15738 373 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 HSPB2Q16082 182 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 SLC25A35Q3KQZ1 300 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 CRY2Q49AN0 593 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 ACSM3Q53FZ2 586 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 OCIAD2Q56VL3 154 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 SOHLH1Q5JUK2 328 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 PRAMEF17Q5VTA0 474 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 PRAMEF9Q5VWM5 478 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 PWWP2BQ6NUJ5 590 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 REEP3Q6NUK4 255 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 CNKSR3Q6P9H4 555 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 KIRREL2Q6UWL6 708 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 SBSNQ6UWP8 590 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 CLEC18BQ6UXF7 455 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 FRRS1Q6ZNA5 592 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 TEX43Q6ZNM6 134 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 LIAT1Q6ZQX7 453 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 ZNF621Q6ZSS3 439 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 TMPRSS7Q7RTY8 843 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 FAM220AQ7Z4H9 259 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 SLC25A42Q86VD7 318 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 KDM8Q8N371 416 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 RNF175Q8N4F7 328 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 C12orf76Q8N812 135 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-211ENST00000539921 CLEC1AQ8NC01 280 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 SLC26A10Q8NG04 563 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 OR9K2Q8NGE7 335 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 OR4B1Q8NGF8 309 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 OR13C4Q8NGS5 318 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 OR6K2Q8NGY2 324 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 OR52J3Q8NH60 311 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 SUN3Q8TAQ9 357 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 ZNF417Q8TAU3 575 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 RPS4Y2Q8TD47 263 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 Q8WTZ3 238 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 SECTM1Q8WVN6 248 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 EMID1Q96A84 441 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-211ENST00000539921 CPNE2Q96FN4 548 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-211ENST00000539921 PPP1R16AQ96I34 528 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 HPDLQ96IR7 371 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 PGLYRP3Q96LB9 341 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 JSRP1Q96MG2 331 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-211ENST00000539921 TMEM56Q96MV1 263 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 LYSMD1Q96S90 227 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 GPR21Q99679 349 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 CMKLR1Q99788 373 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 PYGO2Q9BRQ0 406 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 SLC35A5Q9BS91 424 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 MRIQ9BWK5 157 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 SGPP1Q9BX95 441 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 NELFAQ9H3P2 528 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 CNTD2Q9H8S5 307 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 RPF1Q9H9Y2 349 aaKnown RBP5.56□□□□□ -1.52
SNHG1-211ENST00000539921 ELL3Q9HB65 397 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-211ENST00000539921 NOX4Q9NPH5 578 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 ZNF701Q9NV72 531 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-211ENST00000539921 PGPEP1Q9NXJ5 209 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 TMEM56-RWDD3S4R434 201 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 SCN8AQ9UQD0 1980 aa5.56□□□□□ -1.52
SNHG1-211ENST00000539921 WDR81Q562E7 1941 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 KCNE1BA0A087WTH5 132 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 TRBV4-1A0A0J9YWV2 114 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 TMEM235A6NFC5 223 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 DHRS7CA6NNS2 312 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 SERPINE3A8MV23 424 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 C9JQL5 133 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 CLDN34H7C241 214 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 ETV2O00321 342 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-211ENST00000539921 DCTN6O00399 190 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 FFAR1O14842 300 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 CCL25O15444 150 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 FFAR2O15552 330 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 ZNF264O43296 627 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 SOX15O60248 233 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 ZNF354AO60765 605 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-211ENST00000539921 RAMP3O60896 148 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 CYB5R3P00387 301 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-211ENST00000539921 LCATP04180 440 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 HSPB1P04792 205 aaKnown RBP5.55□□□□□ -1.52
SNHG1-211ENST00000539921 CRYGCP07315 174 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 ERCC1P07992 297 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-211ENST00000539921 DANCRP0C864 163 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 TMIGD3P0DMS9 266 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-211ENST00000539921 ACRP10323 421 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 CD37P11049 281 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 COX7A2P14406 83 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 IL2RBP14784 551 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 DCTDP32321 178 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 OPRD1P41143 372 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 ACAA2P42765 397 aaKnown RBP5.55□□□□□ -1.52
SNHG1-211ENST00000539921 PTGER3P43115 390 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 SLC6A11P48066 632 aa5.55□□□□□ -1.52
SNHG1-211ENST00000539921 CDC34P49427 236 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-211ENST00000539921 BIDP55957 195 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms