RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 CDH11P55287 796 aa13.52□□□□□ -0.25
DDB1-216ENST00000539739 SORDQ00796 357 aa13.52□□□□□ -0.25
DDB1-216ENST00000539739 OCLNQ16625 522 aa13.52□□□□□ -0.25
DDB1-216ENST00000539739 TBRG1Q3YBR2 411 aa13.52□□□□□ -0.25
DDB1-216ENST00000539739 TIMM23BQ5SRD1 257 aa13.52□□□□□ -0.25
DDB1-216ENST00000539739 USP51Q70EK9 711 aa13.52□□□□□ -0.25
DDB1-216ENST00000539739 MEPCEQ7L2J0 689 aaKnown RBP13.52□□□□□ -0.25
DDB1-216ENST00000539739 BCDIN3DQ7Z5W3 292 aaKnown RBP13.52□□□□□ -0.25
DDB1-216ENST00000539739 CLVS1Q8IUQ0 354 aaPredicted RBP13.52□□□□□ -0.25
DDB1-216ENST00000539739 NANOS1Q8WY41 292 aaKnown RBP13.52□□□□□ -0.25
DDB1-216ENST00000539739 TEAD3Q99594 435 aa13.52□□□□□ -0.25
DDB1-216ENST00000539739 DNAJC27Q9NZQ0 273 aa13.52□□□□□ -0.25
DDB1-216ENST00000539739 FLNCQ14315 2725 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 ARPC4-TTLL3A0A0A6YYG9 625 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 OR5H1A6NKK0 313 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 HRGP04196 525 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 ZNF823P16415 610 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 GABRB1P18505 474 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 SLC2A5P22732 501 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 CAPZA2P47755 286 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 LSM6P62312 80 aaKnown RBP13.51□□□□□ -0.25
DDB1-216ENST00000539739 DBPQ10586 325 aaPredicted RBP13.51□□□□□ -0.25
DDB1-216ENST00000539739 MAD2L1BPQ15013 274 aaPredicted RBP13.51□□□□□ -0.25
DDB1-216ENST00000539739 HIKESHIQ53FT3 197 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 FAM27BQ5VT28 67 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 SSX8Q7RTT4 187 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 SLC16A14Q7RTX9 510 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 THAP5Q7Z6K1 395 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 DPPA2Q7Z7J5 298 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 LRRC18Q8N456 261 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 TSPAN14Q8NG11 270 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 GRPEL2Q8TAA5 225 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 ZNRF4Q8WWF5 429 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 NABP1Q96AH0 204 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 S100PBPQ96BU1 408 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 MUCL1Q96DR8 90 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 ZNF582Q96NG8 517 aaPredicted RBP13.51□□□□□ -0.25
DDB1-216ENST00000539739 OBP2BQ9NPH6 170 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 SLC17A5Q9NRA2 495 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 NDRG3Q9UGV2 375 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDB1-216ENST00000539739 POLR1DQ9Y2S0 133 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 KLF2Q9Y5W3 355 aaPredicted RBP13.51□□□□□ -0.25
DDB1-216ENST00000539739 DOPEY1Q5JWR5 2465 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 CACNA1CQ13936 2221 aa13.51□□□□□ -0.25
DDB1-216ENST00000539739 BET1O15155 118 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 ENTPD6O75354 484 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 B3GALNT1O75752 331 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 GPANK1O95872 356 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 WNT11O96014 354 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 RNF224P0DH78 156 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 GAAP10253 952 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 ISL1P61371 349 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 TEKQ02763 1124 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 KCNMB1Q16558 191 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 LINC01590Q5TEZ4 76 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.5□□□□□ -0.25
DDB1-216ENST00000539739 CCDC28AQ8IWP9 274 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 SLC26A10Q8NG04 563 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 TBC1D15Q8TC07 691 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 C11orf40Q8WZ69 217 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 HSD17B8Q92506 261 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 ZMYND19Q96E35 227 aaPredicted RBP13.5□□□□□ -0.25
DDB1-216ENST00000539739 ZNF486Q96H40 463 aaPredicted RBP13.5□□□□□ -0.25
DDB1-216ENST00000539739 WACQ9BTA9 647 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 CDADC1Q9BWV3 514 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 ANKRD60Q9BZ19 345 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 C12orf4Q9NQ89 552 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 WARS2Q9UGM6 360 aaKnown RBP13.5□□□□□ -0.25
DDB1-216ENST00000539739 AMDHD2Q9Y303 409 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 USP9XQ93008 2570 aaPredicted RBP13.5□□□□□ -0.25
DDB1-216ENST00000539739 TVP23AA6NH52 213 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 TMCC2O75069 709 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 MPZL1O95297 269 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 TFP02787 698 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 CST2P09228 141 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 MYF6P23409 242 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 GRNP28799 593 aaKnown RBP13.5□□□□□ -0.25
DDB1-216ENST00000539739 HTR1FP30939 366 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 CCKARP32238 428 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 PCBD1P61457 104 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 ADAM8P78325 824 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 SLC36A2Q495M3 483 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 SKA3Q8IX90 412 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 ZNF511Q8NB15 262 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 HTRA1Q92743 480 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 INTS14Q96SY0 518 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 MED18Q9BUE0 208 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 EMC7Q9NPA0 242 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 AASSQ9UDR5 926 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 KCNG2Q9UJ96 466 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 SPEF1Q9Y4P9 236 aa13.5□□□□□ -0.25
DDB1-216ENST00000539739 LINC00854A0A1B0GVQ3 168 aa13.49□□□□□ -0.25
DDB1-216ENST00000539739 SH3D21A4FU49 640 aa13.49□□□□□ -0.25
DDB1-216ENST00000539739 CCDC182A6NF36 153 aa13.49□□□□□ -0.25
DDB1-216ENST00000539739 TUBAL3A6NHL2 446 aa13.49□□□□□ -0.25
DDB1-216ENST00000539739 C12orf71A8MTZ7 269 aa13.49□□□□□ -0.25
DDB1-216ENST00000539739 ZNF254O75437 659 aa13.49□□□□□ -0.25
DDB1-216ENST00000539739 UBL3O95164 117 aa13.49□□□□□ -0.25
DDB1-216ENST00000539739 SCG5P05408 212 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms